PDB entry 7k5k

View 7k5k on RCSB PDB site
Description: plasmodium vivax m17 leucyl aminopeptidase pv-m17
Deposited on 2020-09-17, released 2020-12-16
The last revision was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: EM
Resolution: 2.66 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Chain 'B':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Chain 'C':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Chain 'D':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Chain 'E':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Chain 'F':
    Compound: M17 leucyl aminopeptidase, putative
    Species: Plasmodium vivax [TaxId:5855]
    Gene: PVC01_120064700, PVP01_1260800
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1G4HHP8 (0-548)
      • expression tag (549-554)
  • Heterogens: CO3, MN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7k5kA (A:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kA (A:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7k5kB (B:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kB (B:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7k5kC (C:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kC (C:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7k5kD (D:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kD (D:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7k5kE (E:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kE (E:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7k5kF (F:)
mattvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssg
gsggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandq
kkyvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrffleh
lfyeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaap
snycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykg
aqtgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigti
kpdnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaekl
gvdyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrss
lnskyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrll
tefvlndavhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7k5kF (F:)
ttvpqvvsldpttipidyhtpiddlsievkdisaeacpadeglivfllnsapkhsssggs
ggnggsagssgngeggaqikinssvkdntineflkegnmenftgklgtsksfyiandqkk
yvslayvgcgpaneeteleirkvayalvtllhdskhkkvsiifeikieealfrfflehlf
yeyvtderfksadkstetdfiknlslhianadaykgqidkarvyfygtyyaaqliaapsn
ycnpvslsnaavelaqkvnleckildvkeleelkmgaylsvgkgsmypnkfihltykgaq
tgasqnekkkialigkgitfdsggynlkaapgsmidlmkfdmsgcaavlgcaycigtikp
dnvevhflsavcenmvsknsyrpgdiitasngktievgntdaegrltladalvyaeklgv
dyivdiatltgamlyslgtsyagvfgnndqlinkilsssktsnepvwwlpiineyrssln
skyadlnnisssvkassvvaslflkefientpwahidiagvswnfkarkpkgfgvrllte
fvlnd