PDB entry 7k41

View 7k41 on RCSB PDB site
Description: Bacterial O-GlcNAcase (OGA) with compound
Class: transferase/transferase inhibitor
Keywords: OGA, virtual screening, structure based drug design, SBDD, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR complex
Deposited on 2020-09-14, released 2021-01-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: o-glcnacase bt_4395
    Species: Escherichia coli K-12 [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7k41a1, d7k41a2, d7k41a3
  • Heterogens: VUA, ACT, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7k41A (A:)
ggsqnvslqpppqqlivqnktidlpavyqlnggeeanphavkvlkellsgkqsskkgmli
sigekgdksvrkysrqipdhkegyylsvnekeivlagndergtyyalqtfaqllkdgklp
eveikdypsvryrgvvegfygtpwshqarlsqlkfygknkmntyiygpkddpyhsapnwr
lpypdkeaaqlqelvavanenevdfvwaihpgqdikwnkedrdlllakfekmyqlgvrsf
avffddisgegtnpqkqaellnyidekfaqvkpdinqlvmcpteynkswsnpngnylttl
gdklnpsiqimwtgdrvisditrdgiswinerikrpayiwwnfpvsdyvrdhlllgpvyg
ndttiakemsgfvtnpmehaesskiaiysvasyawnpakydtwqtwkdairtilpsaaee
lecfamhnsdlgpnghgyrreesmdiqpaaerflkafkegknydkadfetlqytfermke
sadillmntenkpliveitpwvhqfkltaemgeevlkmvegrnesyflrkynhvkalqqq
mfyidqtsnqnpyqpgvktatrvikplidrtfatvvkffnqkfnahldattdymphkmis
nveqiknlplqvkanrvlispanevvkwaagnsveieldaiypgeniqinfgkdapctwg
rleistdgkewktvdlkqkesrlsaglqkapvkfvrftnvsdeeqqvylrqfvltiekk

    Sequence, based on observed residues (ATOM records): (download) 
    >7k41A (A:)
nvslqpppqqlivqnktidlpavyqlnggeeanphavkvlkellsgkqsskkgmlisige
kgdksvrkysrqipdhkegyylsvnekeivlagndergtyyalqtfaqllkdgklpevei
kdypsvryrgvvegfygtpwshqarlsqlkfygknkmntyiygpkddpyhsapnwrlpyp
dkeaaqlqelvavanenevdfvwaihpgqdwnkedrdlllakfekmyqlgvrsfavffdd
isgegtnpqkqaellnyidekfaqvkpdinqlvmcpteynkswsnpngnylttlgdklnp
siqimwtgdrvisditrdgiswinerikrpayiwwnfpvsdyvrdhlllgpvygndttia
kemsgfvtnpmehaesskiaiysvasyawnpakydtwqtwkdairtilpsaaeelecfam
hnsdlgpnghgyrreesmdiqpaaerflkafkegknydkadfetlqytfermkesadill
mntenkpliveitpwvhqfkltaemgeevlkmvegrnesyflrkynhvkalqqqmfyidq
tsnqnpyqpgvktatrvikplidrtfatvvkffnqkfnahldattdymph