PDB entry 7jz2

View 7jz2 on RCSB PDB site
Description: Succinate: quinone oxidoreductase SQR from E.coli K12
Class: electron transport/oxidoreductase
Keywords: Complex, Succinate: quinone oxidoreductase, SdhA, sdhB, SdhC, SdhD, ELECTRON TRANSPORT, ELECTRON TRANSPORT-OXIDOREDUCTASE complex
Deposited on 2020-09-01, released 2021-01-20
The last revision prior to the SCOPe 2.07 freeze date was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: EM
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2a1, d7jz2a2
  • Chain 'B':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2b1, d7jz2b2
  • Chain 'C':
    Compound: succinate dehydrogenase cytochrome b556 subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2c_
  • Chain 'D':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2d_
  • Chain 'E':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2e1, d7jz2e2
  • Chain 'F':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2f1, d7jz2f2
  • Chain 'G':
    Compound: succinate dehydrogenase cytochrome b556 subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2g_
  • Chain 'H':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2h_
  • Chain 'I':
    Compound: Succinate dehydrogenase flavoprotein subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2i1, d7jz2i2
  • Chain 'J':
    Compound: succinate dehydrogenase iron-sulfur subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2j1, d7jz2j2
  • Chain 'K':
    Compound: succinate dehydrogenase cytochrome b556 subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2k_
  • Chain 'L':
    Compound: succinate dehydrogenase hydrophobic membrane anchor subunit
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d7jz2l_
  • Heterogens: F3S, FAD, NA, FES, SF4, 3PE, HEM, UQ2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7jz2A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2A (A:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhpptchymmggiptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslld
lvvfgraaglhlqesiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecm
qhnfsvfregdamakgleqlkvirerlknarlddtssefntqrvecleldnlmetayata
vsanfrtesrgahsrfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirt
y

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7jz2B (B:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7jz2C (C:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2C (C:)
vkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasai
mgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlslla
gvlvw

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7jz2D (D:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2D (D:)
snasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftl
lalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7jz2E (E:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2E (E:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhpptchymmggiptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslld
lvvfgraaglhlqesiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecm
qhnfsvfregdamakgleqlkvirerlknarlddtssefntqrvecleldnlmetayata
vsanfrtesrgahsrfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirt
y

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7jz2F (F:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >7jz2G (G:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2G (G:)
vkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasai
mgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlslla
gvlvw

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >7jz2H (H:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2H (H:)
snasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftl
lalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >7jz2I (I:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhptgiagagvlvtegcrgeggyllnkhgerfmeryapnakdlagrdvvarsimieireg
rgcdgpwgphaklkldhlgkevlesrlpgilelsrtfahvdpvkepipviptchymmggi
ptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslldlvvfgraaglhlq
esiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecmqhnfsvfregdam
akgleqlkvirerlknarlddtssefntqrvecleldnlmetayatavsanfrtesrgah
srfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirty

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2I (I:)
mklpvrefdavvigaggagmraalqisqsgqtcallskvfptrshtvsaqggitvalgnt
hednwewhmydtvkgsdyigdqdaieymcktgpeailelehmglpfsrlddgriyqrpfg
gqsknfggeqaartaaaadrtghallhtlyqqnlknhttifsewyaldlvknqdgavvgc
talcietgevvyfkaratvlatggagriyqsttnahintgdgvgmairagvpvqdmemwq
fhpptchymmggiptkvtgqaltvnekgedvvvpglfavgeiacvsvhganrlggnslld
lvvfgraaglhlqesiaeqgalrdasesdveasldrlnrwnnnrngedpvairkalqecm
qhnfsvfregdamakgleqlkvirerlknarlddtssefntqrvecleldnlmetayata
vsanfrtesrgahsrfdfpdrddenwlchslylpesesmtrrsvnmepklrpafppkirt
y

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7jz2J (J:)
mrlefsiyrynpdvddaprmqdytleadegrdmmlldaliqlkekdpslsfrrscregvc
gsdglnmngknglacitpisalnqpgkkivirplpglpvirdlvvdmgqfyaqyekikpy
llnngqnpparehlqmpeqrekldglyecilcaccstscpsfwwnpdkfigpagllaayr
flidsrdtetdsrldglsdafsvfrchsimncvsvcpkglnptraighiksmllqrna

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >7jz2K (K:)
mirnvkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeq
asaimgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvl
sllagvlvw

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2K (K:)
vkkqrpvnldlqtirfpitaiasilhrvsgvitfvavgillwllgtslsspegfeqasai
mgsffvkfimwgiltalayhvvvgirhmmmdfgyleetfeagkrsakisfvitvvlslla
gvlvw

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >7jz2L (L:)
mvsnasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvf
tllalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv

    Sequence, based on observed residues (ATOM records): (download) 
    >7jz2L (L:)
snasalgrngvhdfilvrataivltlyiiymvgffatsgeltyevwigffasaftkvftl
lalfsilihawigmwqvltdyvkplalrlmlqlvivvalvvyviygfvvvwgv