PDB entry 7jwf

View 7jwf on RCSB PDB site
Description: crystal structure of pdgh110b d344n in complex with alpha-(1,3)- galactobiose
Deposited on 2020-08-25, released 2020-11-04
The last revision was dated 2021-01-06, with a file datestamp of 2021-01-01.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycoside hydrolase family 110
    Species: Pseudoalteromonas distincta [TaxId:77608]
    Database cross-references and differences (RAF-indexed):
    • PDB 7JWF
  • Chain 'B':
    Compound: Glycoside hydrolase family 110
    Species: Pseudoalteromonas distincta [TaxId:77608]
    Database cross-references and differences (RAF-indexed):
    • PDB 7JWF
  • Chain 'C':
    Compound: Glycoside hydrolase family 110
    Species: Pseudoalteromonas distincta [TaxId:77608]
    Database cross-references and differences (RAF-indexed):
    • PDB 7JWF
  • Chain 'D':
    Compound: Glycoside hydrolase family 110
    Species: Pseudoalteromonas distincta [TaxId:77608]
    Database cross-references and differences (RAF-indexed):
    • PDB 7JWF
  • Heterogens: GAL, GLA, MLT, EDO, IOD, PG4, CA, ACT, CL, MLA, MLI, EPE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jwfA (A:)
mgsshhhhhhssglvprgshmasndkvidvsdfgaikdtgsdsthslykalqeakkigat
kitfpkgrydfyeeraadrlmyisnndpgikritfplssfnnleidgnnstfifhgglvp
fildesshivlrnfsidfsrafhsealiagagkgyldlkftdqfpykineagilkfqsql
fqasgiknkdrlkrkqisqdeykyeykrvlefnfalrepeymaqdiftgnalraeklngg
dvvrifhpnlkakvgnilvfqakhrdypgvvisdsnnvelhnitihhaggmgviaqrshn
itikdskvspskgrivsttadathfvnctgkiklidnlfesqkndatnihgvyaaidkii
ddktveiklqhpqqfgfdfiapedelelvhgaslityetnkvvtstrvsnevtrvqfikp
fdsrikegdsvskvrsyaeviikgniirknrargmllnsrgktliennyfhtpgsailfe
gdanfwfeqggvsdvtiknnvfensfysqwgkgiiavdagiddkfketsrynknivikgn
tfkvfdkapilnlfsvsnlvfenniiektteyperkkynslfvinnsdnitisinnilqg
fsegksqllsptttykrakn

    Sequence, based on observed residues (ATOM records):
    >7jwfA (A:)
dkvidvsdfgaikdtgsdsthslykalqeakkigatkitfpkgrydfyeeraadrlmyis
nndpgikritfplssfnnleidgnnstfifhgglvpfildesshivlrnfsidfsrafhs
ealiagagkgyldlkftdqfpykineagilkfqsqlfdrlkrkqisqdeykyeykrvlef
nfalrepeymaqdiftgnalraeklngdvvrifhpnlkakvgnilvfqakhrdypgvvis
dsnnvelhnitihhaggmgviaqrshnitikdskvspskgrivsttadathfvnctgkik
lidnlfesqkndatnihgvyaaidkiiddktveiklqhpqqfgfdfiapedelelvhgas
lityetnkvvtstrvsnevtrvqfikpfdsrikegdsvskvrsyaeviikgniirknrar
gmllnsrgktliennyfhtpgsailfegdanfwfeqggvsdvtiknnvfensfysqwgkg
iiavdagiddkfketsrynknivikgntfkvfdkapilnlfsvsnlvfenniiektteyp
erkkynslfvinnsdnitisinnilqgfsegksqllsptttykr

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7jwfB (B:)
mgsshhhhhhssglvprgshmasndkvidvsdfgaikdtgsdsthslykalqeakkigat
kitfpkgrydfyeeraadrlmyisnndpgikritfplssfnnleidgnnstfifhgglvp
fildesshivlrnfsidfsrafhsealiagagkgyldlkftdqfpykineagilkfqsql
fqasgiknkdrlkrkqisqdeykyeykrvlefnfalrepeymaqdiftgnalraeklngg
dvvrifhpnlkakvgnilvfqakhrdypgvvisdsnnvelhnitihhaggmgviaqrshn
itikdskvspskgrivsttadathfvnctgkiklidnlfesqkndatnihgvyaaidkii
ddktveiklqhpqqfgfdfiapedelelvhgaslityetnkvvtstrvsnevtrvqfikp
fdsrikegdsvskvrsyaeviikgniirknrargmllnsrgktliennyfhtpgsailfe
gdanfwfeqggvsdvtiknnvfensfysqwgkgiiavdagiddkfketsrynknivikgn
tfkvfdkapilnlfsvsnlvfenniiektteyperkkynslfvinnsdnitisinnilqg
fsegksqllsptttykrakn

    Sequence, based on observed residues (ATOM records):
    >7jwfB (B:)
dkvidvsdfgaikdtgsdsthslykalqeakkigatkitfpkgrydfyeeraadrlmyis
nndpgikritfplssfnnleidgnnstfifhgglvpfildesshivlrnfsidfsrafhs
ealiagagkgyldlkftdqfpykineagilkfqsqlfdrlkrkqisqdeykyeykrvlef
nfalrepeymaqdiftgnalraeklndvvrifhpnlkakvgnilvfqakhrdypgvvisd
snnvelhnitihhaggmgviaqrshnitikdskvspskgrivsttadathfvnctgkikl
idnlfesqkndatnihgvyaaidkiiddktveiklqhpqqfgfdfiapedelelvhgasl
ityetnkvvtstrvsnevtrvqfikpfdsrikegdsvskvrsyaeviikgniirknrarg
mllnsrgktliennyfhtpgsailfegdanfwfeqggvsdvtiknnvfensfysqwgkgi
iavdagiddkfketsrynknivikgntfkvfdkapilnlfsvsnlvfenniiektteype
rkkynslfvinnsdnitisinnilqgfsegksqllsptttyk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7jwfC (C:)
mgsshhhhhhssglvprgshmasndkvidvsdfgaikdtgsdsthslykalqeakkigat
kitfpkgrydfyeeraadrlmyisnndpgikritfplssfnnleidgnnstfifhgglvp
fildesshivlrnfsidfsrafhsealiagagkgyldlkftdqfpykineagilkfqsql
fqasgiknkdrlkrkqisqdeykyeykrvlefnfalrepeymaqdiftgnalraeklngg
dvvrifhpnlkakvgnilvfqakhrdypgvvisdsnnvelhnitihhaggmgviaqrshn
itikdskvspskgrivsttadathfvnctgkiklidnlfesqkndatnihgvyaaidkii
ddktveiklqhpqqfgfdfiapedelelvhgaslityetnkvvtstrvsnevtrvqfikp
fdsrikegdsvskvrsyaeviikgniirknrargmllnsrgktliennyfhtpgsailfe
gdanfwfeqggvsdvtiknnvfensfysqwgkgiiavdagiddkfketsrynknivikgn
tfkvfdkapilnlfsvsnlvfenniiektteyperkkynslfvinnsdnitisinnilqg
fsegksqllsptttykrakn

    Sequence, based on observed residues (ATOM records):
    >7jwfC (C:)
dkvidvsdfgaikdtgsdsthslykalqeakkigatkitfpkgrydfyeeraadrlmyis
nndpgikritfplssfnnleidgnnstfifhgglvpfildesshivlrnfsidfsrafhs
ealiagagkgyldlkftdqfpykineagilkfqsqlfdrlkrkqisqdeykyeykrvlef
nfalrepeymaqdiftgnalraeklndvvrifhpnlkakvgnilvfqakhrdypgvvisd
snnvelhnitihhaggmgviaqrshnitikdskvspskgrivsttadathfvnctgkikl
idnlfesqkndatnihgvyaaidkiiddktveiklqhpqqfgfdfiapedelelvhgasl
ityetnkvvtstrvsnevtrvqfikpfdsrikegdsvskvrsyaeviikgniirknrarg
mllnsrgktliennyfhtpgsailfegdanfwfeqggvsdvtiknnvfensfysqwgkgi
iavdagiddkfketsrynknivikgntfkvfdkapilnlfsvsnlvfenniiektteype
rkkynslfvinnsdnitisinnilqgfsegksqllsptttyk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7jwfD (D:)
mgsshhhhhhssglvprgshmasndkvidvsdfgaikdtgsdsthslykalqeakkigat
kitfpkgrydfyeeraadrlmyisnndpgikritfplssfnnleidgnnstfifhgglvp
fildesshivlrnfsidfsrafhsealiagagkgyldlkftdqfpykineagilkfqsql
fqasgiknkdrlkrkqisqdeykyeykrvlefnfalrepeymaqdiftgnalraeklngg
dvvrifhpnlkakvgnilvfqakhrdypgvvisdsnnvelhnitihhaggmgviaqrshn
itikdskvspskgrivsttadathfvnctgkiklidnlfesqkndatnihgvyaaidkii
ddktveiklqhpqqfgfdfiapedelelvhgaslityetnkvvtstrvsnevtrvqfikp
fdsrikegdsvskvrsyaeviikgniirknrargmllnsrgktliennyfhtpgsailfe
gdanfwfeqggvsdvtiknnvfensfysqwgkgiiavdagiddkfketsrynknivikgn
tfkvfdkapilnlfsvsnlvfenniiektteyperkkynslfvinnsdnitisinnilqg
fsegksqllsptttykrakn

    Sequence, based on observed residues (ATOM records):
    >7jwfD (D:)
dkvidvsdfgaikdtgsdsthslykalqeakkigatkitfpkgrydfyeeraadrlmyis
nndpgikritfplssfnnleidgnnstfifhgglvpfildesshivlrnfsidfsrafhs
ealiagagkgyldlkftdqfpykineagilkfqsqlfdrlkrkqisqdeykyeykrvlef
nfalrepeymaqdiftgnalraeklndvvrifhpnlkakvgnilvfqakhrdypgvvisd
snnvelhnitihhaggmgviaqrshnitikdskvspskgrivsttadathfvnctgkikl
idnlfesqkndatnihgvyaaidkiiddktveiklqhpqqfgfdfiapedelelvhgasl
ityetnkvvtstrvsnevtrvqfikpfdsrikegdsvskvrsyaeviikgniirknrarg
mllnsrgktliennyfhtpgsailfegdanfwfeqggvsdvtiknnvfensfysqwgkgi
iavdagiddkfketsrynknivikgntfkvfdkapilnlfsvsnlvfenniiektteype
rkkynslfvinnsdnitisinnilqgfsegksqllsptttyk