PDB entry 7jvl

View 7jvl on RCSB PDB site
Description: structure of the m101a variant of the sida ornithine hydroxylase complexed with nadp and the fad in the "out" conformation
Deposited on 2020-08-21, released 2020-12-02
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-ornithine N(5)-monooxygenase
    Species: Neosartorya fumigata [TaxId:330879]
    Gene: sidA, Afu2g07680
    Database cross-references and differences (RAF-indexed):
    • Uniprot E9QYP0
      • engineered mutation (100)
  • Chain 'B':
    Compound: L-ornithine N(5)-monooxygenase
    Species: Neosartorya fumigata [TaxId:330879]
    Gene: sidA, Afu2g07680
    Database cross-references and differences (RAF-indexed):
    • Uniprot E9QYP0
      • engineered mutation (100)
  • Chain 'C':
    Compound: L-ornithine N(5)-monooxygenase
    Species: Neosartorya fumigata [TaxId:330879]
    Gene: sidA, Afu2g07680
    Database cross-references and differences (RAF-indexed):
    • Uniprot E9QYP0
      • engineered mutation (100)
  • Chain 'D':
    Compound: L-ornithine N(5)-monooxygenase
    Species: Neosartorya fumigata [TaxId:330879]
    Gene: sidA, Afu2g07680
    Database cross-references and differences (RAF-indexed):
    • Uniprot E9QYP0
      • engineered mutation (100)
  • Heterogens: NAP, FAD, ACT, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jvlA (A:)
mesverksessylgmrnmqpeqrlsldpprlrstpqdelhdllcvgfgpaslaiaialhd
aldprlnksasnihaqpkicflerqkqfawhsgmlvpgskaqisfikdlatlrdprssft
flnylhqkgrlihftnlstflparlefedymrwcaqqfsdvvaygeevvevipgksdpss
svvdfftvrsrnvetgeisarrtrkvviaiggtakmpsglpqdpriihsskycttlpall
kdkskpyniavlgsgqsaaeifhdlqkrypnsrttlimrdsamrpsddspfvneifnper
vdkfysqsaaerqrslladkatnysvvrlelieeiyndmylqrvknpdetqwqhrilper
kitrvehhgpqsrmrihlksskpesegaandvketlevdalmvatgynrnaherllskvq
hlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsllsvlavrggemvq
sifgeqleraavqghqlraml

    Sequence, based on observed residues (ATOM records):
    >7jvlA (A:)
rlrstpqdelhdllcvgfgpaslaiaialhdaldprlnqpkicflerqkqfawhsgmlvp
gskaqisfikdlatlrdprssftflnylhqkgrlihftnlstflparlefedymrwcaqq
fsdvvaygeevvevipgkssvvdfftvrsrnvetgeisarrtrkvviaiggtakmpsglp
qdpriihsskycttlpallkdkskpyniavlgsgqsaaeifhdlqkrypnsrttlimrds
amrpsddspfvneifnpervdkfysqsaaerqrslladkatnysvvrlelieeiyndmyl
qrvknpdetqwqhrilperkitrvehhgpqsrmrihlksskpketlevdalmvatgynrn
aherllskvqhlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsllsv
lavrggemvqsifgeqler

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7jvlB (B:)
mesverksessylgmrnmqpeqrlsldpprlrstpqdelhdllcvgfgpaslaiaialhd
aldprlnksasnihaqpkicflerqkqfawhsgmlvpgskaqisfikdlatlrdprssft
flnylhqkgrlihftnlstflparlefedymrwcaqqfsdvvaygeevvevipgksdpss
svvdfftvrsrnvetgeisarrtrkvviaiggtakmpsglpqdpriihsskycttlpall
kdkskpyniavlgsgqsaaeifhdlqkrypnsrttlimrdsamrpsddspfvneifnper
vdkfysqsaaerqrslladkatnysvvrlelieeiyndmylqrvknpdetqwqhrilper
kitrvehhgpqsrmrihlksskpesegaandvketlevdalmvatgynrnaherllskvq
hlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsllsvlavrggemvq
sifgeqleraavqghqlraml

    Sequence, based on observed residues (ATOM records):
    >7jvlB (B:)
rlrstpqdelhdllcvgfgpaslaiaialhdaldprlnqpkicflerqkqfawhsgmlvp
gskaqisfikdlatlrdprssftflnylhqkgrlihftnlstflparlefedymrwcaqq
fsdvvaygeevvevipgksdpsssvvdfftvrsrnvetgeisarrtrkvviaiggtakmp
sglpqdpriihsskycttlpallkdkskpyniavlgsgqsaaeifhdlqkrypnsrttli
mrdsamrpsddspfvneifnpervdkfysqsaaerqrslladkatnysvvrlelieeiyn
dmylqrvknpdetqwqhrilperkitrvehhgpqsrmrihlksskpketlevdalmvatg
ynrnaherllskvqhlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsds
llsvlavrggemvqsifgeqle

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7jvlC (C:)
mesverksessylgmrnmqpeqrlsldpprlrstpqdelhdllcvgfgpaslaiaialhd
aldprlnksasnihaqpkicflerqkqfawhsgmlvpgskaqisfikdlatlrdprssft
flnylhqkgrlihftnlstflparlefedymrwcaqqfsdvvaygeevvevipgksdpss
svvdfftvrsrnvetgeisarrtrkvviaiggtakmpsglpqdpriihsskycttlpall
kdkskpyniavlgsgqsaaeifhdlqkrypnsrttlimrdsamrpsddspfvneifnper
vdkfysqsaaerqrslladkatnysvvrlelieeiyndmylqrvknpdetqwqhrilper
kitrvehhgpqsrmrihlksskpesegaandvketlevdalmvatgynrnaherllskvq
hlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsllsvlavrggemvq
sifgeqleraavqghqlraml

    Sequence, based on observed residues (ATOM records):
    >7jvlC (C:)
lrstpqdelhdllcvgfgpaslaiaialhdaldprlnqpkicflerqkqfawhsgmlvpg
skaqisfikdlatlrdprssftflnylhqkgrlihftnlstflparlefedymrwcaqqf
sdvvaygeevvevipgksdpsssvvdfftvrsrnvetgeisarrtrkvviaiggtakmps
glpqdpriihsskycttlpallkdkskpyniavlgsgqsaaeifhdlqkrypnsrttlim
rdsamrpsddspfvneifnpervdkfysqsaaerqrslladkatnysvvrlelieeiynd
mylqrvknpdetqwqhrilperkitrvehhgpqsrmrihlksskpketlevdalmvatgy
nrnaherllskvqhlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsl
lsvlavrggemvqsifgeqle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7jvlD (D:)
mesverksessylgmrnmqpeqrlsldpprlrstpqdelhdllcvgfgpaslaiaialhd
aldprlnksasnihaqpkicflerqkqfawhsgmlvpgskaqisfikdlatlrdprssft
flnylhqkgrlihftnlstflparlefedymrwcaqqfsdvvaygeevvevipgksdpss
svvdfftvrsrnvetgeisarrtrkvviaiggtakmpsglpqdpriihsskycttlpall
kdkskpyniavlgsgqsaaeifhdlqkrypnsrttlimrdsamrpsddspfvneifnper
vdkfysqsaaerqrslladkatnysvvrlelieeiyndmylqrvknpdetqwqhrilper
kitrvehhgpqsrmrihlksskpesegaandvketlevdalmvatgynrnaherllskvq
hlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsllsvlavrggemvq
sifgeqleraavqghqlraml

    Sequence, based on observed residues (ATOM records):
    >7jvlD (D:)
rlrstpqdelhdllcvgfgpaslaiaialhdaldprlnqpkicflerqkqfawhsgmlvp
gskaqisfikdlatlrdprssftflnylhqkgrlihftnlstflparlefedymrwcaqq
fsdvvaygeevvevipgksdpsssvvdfftvrsrnvetgeisarrtrkvviaiggtakmp
sglpqdpriihsskycttlpallkdkskpyniavlgsgqsaaeifhdlqkrypnsrttli
mrdsamrpsddspfvneifnpervdkfysqsaaerqrslladkatnysvvrlelieeiyn
dmylqrvknpdetqwqhrilperkitrvehhgpqsrmrihlksskpetlevdalmvatgy
nrnaherllskvqhlrptgqdqwkphrdyrvemdpskvsseagiwlqgcnerthglsdsl
lsvlavrggemvqsifgeql