PDB entry 7jqp

View 7jqp on RCSB PDB site
Description: the phi-28 gp11 dna packaging motor
Deposited on 2020-08-11, released 2021-06-16
The last revision was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Encapsidation protein
    Species: Lactococcus phage asccphi28 [TaxId:503388]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1ABI1 (0-365)
      • expression tag (366-373)
  • Chain 'B':
    Compound: Encapsidation protein
    Species: Lactococcus phage asccphi28 [TaxId:503388]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1ABI1 (0-365)
      • expression tag (366-373)
  • Chain 'C':
    Compound: Encapsidation protein
    Species: Lactococcus phage asccphi28 [TaxId:503388]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1ABI1 (0-365)
      • expression tag (366-373)
  • Chain 'D':
    Compound: Encapsidation protein
    Species: Lactococcus phage asccphi28 [TaxId:503388]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1ABI1 (0-365)
      • expression tag (366-373)
  • Chain 'E':
    Compound: Encapsidation protein
    Species: Lactococcus phage asccphi28 [TaxId:503388]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B1ABI1 (0-365)
      • expression tag (366-373)
  • Heterogens: SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jqpA (A:)
mitksnefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgve
ideleknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrci
vyfialsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkre
dfylfmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvr
lgaknrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvy
ktldglenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewsk
fvyalklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >7jqpA (A:)
snefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgveidel
eknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrcivyfi
alsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkredfyl
fmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvrlgak
nrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvyktld
glenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewskfvya
lkle

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7jqpB (B:)
mitksnefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgve
ideleknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrci
vyfialsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkre
dfylfmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvr
lgaknrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvy
ktldglenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewsk
fvyalklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >7jqpB (B:)
fwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgveidelekn
nfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrcivyfials
raghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkredfylfml
snvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvrlgaknrd
fsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvyktldgle
nitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewskfvyalkl

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7jqpC (C:)
mitksnefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgve
ideleknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrci
vyfialsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkre
dfylfmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvr
lgaknrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvy
ktldglenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewsk
fvyalklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >7jqpC (C:)
efwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgveidelek
nnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrcivyfial
sraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkredfylfm
lsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvrlgaknr
dfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvyktldgl
enitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewskfvyalk
le

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7jqpD (D:)
mitksnefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgve
ideleknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrci
vyfialsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkre
dfylfmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvr
lgaknrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvy
ktldglenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewsk
fvyalklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >7jqpD (D:)
fwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgveidelekn
nfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrcivyfials
raghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkredfylfml
snvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvrlgaknrd
fsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvyktldgle
nitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewskfvyalkl
e

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7jqpE (E:)
mitksnefwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgve
ideleknnfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrci
vyfialsraghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkre
dfylfmlsnvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvr
lgaknrdfsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvy
ktldglenitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewsk
fvyalklehhhhhh

    Sequence, based on observed residues (ATOM records):
    >7jqpE (E:)
fwtpkrlletddriflvvggrgvgktfnvtgealddlffnnvsmvylrrlgveidelekn
nfiteemlrvyfgnrfsdfnadeskqimrfsidgaiheikairnkiffddrcivyfials
raghvksnnypdvkylvfdeviidrsimpnaryirneftvllnlietikrkredfylfml
snvgenfnpifaglgyylthedikkgfvkredycvqfvenkqeelnmtdpfvrlgaknrd
fsnsktnafenirtpyfkhygkkpkllvkydrqylgiaerkipsgleyyyqvyktldgle
nitvfnnnfdtlmedevfleetqlkkkfktyfelfqqnmvyhespetflewskfvyalkl
e