PDB entry 7jn5
View 7jn5 on RCSB PDB site
Description: Crystal structure of SARS-CoV receptor binding domain in complex with human antibody CR3022
Class: Viral protein/IMMUNE SYSTEM
Keywords: SARS, coronavirus, antibody, IMMUNE SYSTEM, Viral protein-IMMUNE SYSTEM complex
Deposited on
2020-08-03, released
2020-10-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2021-05-12, with a file datestamp of
2021-05-07.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'F':
Compound: Spike glycoprotein
Species: Human SARS coronavirus [TaxId:694009]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d7jn5f_ - Chain 'H':
Compound: CR3022 Heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d7jn5h_ - Chain 'L':
Compound: CR3022 Light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d7jn5l1, d7jn5l2 - Heterogens: PO4, NAG, HOH
PDB Chain Sequences:
- Chain 'F':
Sequence, based on SEQRES records: (download)
>7jn5F (F:)
rvvpsgdvvrfpnitnlcpfgevfnatkfpsvyawerkkisncvadysvlynstffstfk
cygvsatklndlcfsnvyadsfvvkgddvrqiapgqtgviadynyklpddfmgcvlawnt
rnidatstgnhnykyrylrhgklrpferdisnvpfspdgkpctppalncywplndygfyt
ttgigyqpyrvvvlsfellnapatvcgpklstdliknqcvnfsghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>7jn5F (F:)
cpfgevfnatkfpsvyawerkkisncvadysvlynstffstfkcygvsatklndlcfsnv
yadsfvvkgddvrqiapgqtgviadynyklpddfmgcvlawntrnykyrylrhgklrpfe
rdisnvpfspdgkpctppalncywplndygfytttgigyqpyrvvvlsfenapatvcgp
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>7jn5H (H:)
qmqlvqsgtevkkpgeslkisckgsgygfitywigwvrqmpgkglewmgiiypgdsetry
spsfqgqvtisadksintaylqwsslkasdtaiyycaggsgistpmdvwgqgttvtvvsr
rlppsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc
- Chain 'L':
Sequence, based on SEQRES records: (download)
>7jn5L (L:)
diqltqspdslavslgeratinckssqsvlyssinknylawyqqkpgqppklliywastr
esgvpdrfsgsgsgtdftltisslqaedvavyycqqyystpytfgqgtkveikrtvaaps
vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
lsstltlskadyekhkvyacevthqglsspvtksfnrgecs
Sequence, based on observed residues (ATOM records): (download)
>7jn5L (L:)
diqltqspdslavslgeratinckssqsvlyssinknylawyqqkpgqppklliywastr
esgvpdrfsgsgsgtdftltisslqaedvavyycqqyystpytfgqgtkveikrtvaaps
vfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstys
lsstltlskadyekhkvyacevthqglsspvtksfnrgec