PDB entry 7jkr

View 7jkr on RCSB PDB site
Description: GTP-specific succinyl-CoA synthetase complexed with Mg-GMPPNP, phosphohistidine loop pointing towards nucleotide binding site
Class: ligase
Keywords: Complex, LIGASE
Deposited on 2020-07-28, released 2021-03-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: XRAY
Resolution: 2.64 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
    Species: Sus scrofa [TaxId:9823]
    Gene: SUCLG1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7jkra1, d7jkra2
  • Chain 'B':
    Compound: Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
    Species: Sus scrofa [TaxId:9823]
    Gene: SUCLG2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53590 (1-End)
      • initiating methionine (0)
    Domains in SCOPe 2.08: d7jkrb1, d7jkrb2
  • Heterogens: GNP, GOL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7jkrA (A:)
sytasrkhlyvdkntkvicqgftgkqgtfhsqqaleygtnlvggttpgkggkthlglpvf
ntvkeakeqtgatasviyvpppfaaaaineaidaevplvvcitegipqqdmvrvkhrllr
qgktrligpncpgvinpgeckigimpghihkkgrigivsrsgtltyeavhqttqvglgqs
lcvgiggdpfngtdftdcleiflndpategiiligeiggnaeenaaeflkqhnsgpkskp
vvsfiagltappgrrmghagaiiaggkggakekitalqsagvvvsmspaqlgttiykefe
krkml

    Sequence, based on observed residues (ATOM records): (download) 
    >7jkrA (A:)
sytasrkhlyvdkntkvicqgftgkqgtfhsqqaleygtnlvggttpgkggkthlglpvf
ntvkeakeqtgatasviyvpppfaaaaineaidaevplvvcitegipqqdmvrvkhrllr
qgktrligpncpgvinpgeckigimpghihkkgrigivsrsgtltyeavhqttqvglgqs
lcvgiggdpfngtdftdcleiflndpategiiligeiggnaeenaaeflkqhnsgpkskp
vvsfiagltappgrrmghagaiiaggakekitalqsagvvvsmspaqlgttiykefekrk
ml

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7jkrB (B:)
mnlqeyqskklmsdngvkvqrffvadtanealeaakrlnakeivlkaqilaggrgkgvfs
sglkggvhltkdpevvgqlakqmigynlatkqtpkegvkvnkvmvaealdisretylail
mdrscngpvlvgspqggvdieevaasnpelifkeqidiiegikdsqaqrmaenlgflgpl
qnqaadqikklynlflkidatqvevnpfgetpegqvvcfdakinfddnaefrqkdifamd
dksenepieneaakydlkyigldgniacfvngaglamatcdiiflnggkpanfldlgggv
kesqvyqafklltadpkveailvnifggivncaiiangitkacrelelkvplvvrlegtn
vheaqniltnsglpitsavdledaakkavasvtkk

    Sequence, based on observed residues (ATOM records): (download) 
    >7jkrB (B:)
mnlqeyqskklmsdngvkvqrffvadtanealeaakrlnakeivlkaqilaggrgkgvfs
sglkggvhltkdpevvgqlakqmigynlatkqtpkegvkvnmvaealdisretylailmd
rscngpvlvgspqggvdieevaasnpelifkeqidiiegikdsqaqrmaenlgflgplqn
qaadqikklynlflkidatqvevnpfgetpegqvvcfdakinfddnaefrqkdifamddk
senepieneaakydlkyigldgniacfvngaglamatcdiiflnggkpanfldlgggvke
sqvyqafklltadpkveailvnifggivncaiiangitkacrelelkvplvvrlegtnvh
eaqniltnsglpitsavdledaakkavasv