PDB entry 7jkq

View 7jkq on RCSB PDB site
Description: human dpp9-card8 complex
Deposited on 2020-07-28, released 2021-05-26
The last revision was dated 2021-07-28, with a file datestamp of 2021-07-23.
Experiment type: EM
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dipeptidyl peptidase 9
    Species: Homo sapiens [TaxId:9606]
    Gene: DPP9, DPRP2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Caspase recruitment domain-containing protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: CARD8, KIAA0955, NDPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Caspase recruitment domain-containing protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: CARD8, KIAA0955, NDPP1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Dipeptidyl peptidase 9
    Species: Homo sapiens [TaxId:9606]
    Gene: DPP9, DPRP2
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jkqA (A:)
mattgtptadrgdaaatddpaarfqvqkhswdglrsiihgsrkysglivnkaphdfqfvq
ktdesgphshrlyylgmpygsrensllyseipkkvrkeallllswkqmldhfqatphhgv
ysreeellrerkrlgvfgitsydfhsesglflfqasnslfhcrdggkngfmvspmkplei
ktqcsgprmdpkicpadpaffsfinnsdlwvanietgeerrltfchqglsnvlddpksag
vatfviqeefdrftgywwcptaswegseglktlrilyeevdesevevihvpspaleerkt
dsyryprtgsknpkialklaefqtdsqgkivstqekelvqpfsslfpkveyiaragwtrd
gkyawamfldrpqqwlqlvllppalfipsteneeqrlasaravprnvqpyvvyeevtnvw
invhdifypfpqsegedelcflranecktgfchlykvtavlksqgydwsepfspgedefk
cpikeeialtsgewevlarhgskiwvneetklvyfqgtkdtplehhlyvvsyeaageivr
lttpgfshscsmsqnfdmfvshyssvstppcvhvyklsgpdddplhkqprfwasmmeaas
cppdyvppeifhfhtrsdvrlygmiykphalqpgkkhptvlfvyggpqvqlvnnsfkgik
ylrlntlaslgyavvvidgrgscqrglrfegalknqmgqveiedqveglqfvaekygfid
lsrvaihgwsyggflslmglihkpqvfkvaiagapvtvwmaydtgyterymdvpennqhg
yeagsvalhveklpnepnrllilhgfldenvhffhtnflvsqliragkpyqlqiypnerh
sircpesgehyevtllhflqeyl

    Sequence, based on observed residues (ATOM records):
    >7jkqA (A:)
ddpaarfqvqkhswdglrsiihgsrkysglivnkaphdfqfvqktdesgphshrlyylgm
pygsrensllyseipkkvrkeallllswkqmldhfqatpvfgitsydfhsesglflfqas
nslfhcrdggkngfmvspmkpleiktqcsgprmdpkicpadpaffsfinnsdlwvaniet
geerrltfchqglsnvlddpksagvatfviqeefdrftgywwcptaswegseglktlril
yeevdesevevihvpspaleerktdsyryprtgsknpkialklaefqtdsqgkivstqek
elvqpfsslfpkveyiaragwtrdgkyawamfldrpqqwlqlvllppalfipsteneeqr
lasaravprnvqpyvvyeevtnvwinvhdifypfpqsegedelcflranecktgfchlyk
vtavlksqgydwsepfspgedefkcpikeeialtsgewevlarhgskiwvneetklvyfq
gtkdtplehhlyvvsyeaageivrlttpgfshscsmsqnfdmfvshyssvstppcvhvyk
lsgpdddplhkqprfwasmmeaascppdyvppeifhfhtrsdvrlygmiykphalqpgkk
hptvlfvyggpqvqlvnnsfkgikylrlntlaslgyavvvidgrgscqrglrfegalknq
mgqveiedqveglqfvaekygfidlsrvaihgwsyggflslmglihkpqvfkvaiagapv
tvwmaydtgyterymdvpennqhgyeagsvalhveklpnepnrllilhgfldenvhffht
nflvsqliragkpyqlqiypnerhsircpesgehyevtllhflqeyl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7jkqB (B:)
mekkecpeksssseeelprrdsgssrnidasklirlqgsrkllvdnsirelqytktgiff
qaeacvtndtvyrelpcvsetlcdishffqeddeteaepllfravpecqlsggdipsvse
eqessegqdsgdicseenqivssyaskvcfeieedyknrqflgpegnvdvelidkstnry
svwfptagwylwsatglgflvrdevtvtiafgswsqhlaldlqhheqwlvggplfdvtae
peeavaeihlphfislqagevdvswflvahfknegmvlehparvepfyavlespsfslmg
illriasgtrlsipitsntliyyhphpedikfhlylvpsdalltkaiddeedrfhgvrlq
tsppmeplnfgssyivsnsanlkvmpkelklsyrspgeiqhfskfyagqmkepiqleite
krhgtlvwdtevkpvdlqlvaasapppfsgaafvkenhrqlqarmgdlkgvlddlqdnev
ltenekelveqektrqskneallsmvekkgdlaldvlfrsiserdpylvsylrqqnl

    Sequence, based on observed residues (ATOM records):
    >7jkqB (B:)
gnvdvelidkstnrysvwfptagwylwsatglgflvrdevtvtiafgswsqhlaldlqhh
eqwlvggplfdvtaepeeavaeihlphfislqagevdvswflvahfknegmvlehparve
pfyavlespsriasgtrlsipitsntliyyhphpedikfhlylvpsdalltkaiddeedr
fhgvrlqtsppmeplnfgssyivsnsanlkvmpkelklsyrspgeiqhfskfyagqmkep
iqleitekrhgtlvwdtevkpvdlqlvaasap

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7jkqC (C:)
mekkecpeksssseeelprrdsgssrnidasklirlqgsrkllvdnsirelqytktgiff
qaeacvtndtvyrelpcvsetlcdishffqeddeteaepllfravpecqlsggdipsvse
eqessegqdsgdicseenqivssyaskvcfeieedyknrqflgpegnvdvelidkstnry
svwfptagwylwsatglgflvrdevtvtiafgswsqhlaldlqhheqwlvggplfdvtae
peeavaeihlphfislqagevdvswflvahfknegmvlehparvepfyavlespsfslmg
illriasgtrlsipitsntliyyhphpedikfhlylvpsdalltkaiddeedrfhgvrlq
tsppmeplnfgssyivsnsanlkvmpkelklsyrspgeiqhfskfyagqmkepiqleite
krhgtlvwdtevkpvdlqlvaasapppfsgaafvkenhrqlqarmgdlkgvlddlqdnev
ltenekelveqektrqskneallsmvekkgdlaldvlfrsiserdpylvsylrqqnl

    Sequence, based on observed residues (ATOM records):
    >7jkqC (C:)
liyyhphpedikfhlylvpsdalltkaiddeedrfhgvrlqtsppmeplnfgssyivsns
anlkvmpkelklsyrspgeiqhfskfyagqmkepiqleitekrhgtlvwdtevkpvdlql
vaasapp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7jkqD (D:)
mattgtptadrgdaaatddpaarfqvqkhswdglrsiihgsrkysglivnkaphdfqfvq
ktdesgphshrlyylgmpygsrensllyseipkkvrkeallllswkqmldhfqatphhgv
ysreeellrerkrlgvfgitsydfhsesglflfqasnslfhcrdggkngfmvspmkplei
ktqcsgprmdpkicpadpaffsfinnsdlwvanietgeerrltfchqglsnvlddpksag
vatfviqeefdrftgywwcptaswegseglktlrilyeevdesevevihvpspaleerkt
dsyryprtgsknpkialklaefqtdsqgkivstqekelvqpfsslfpkveyiaragwtrd
gkyawamfldrpqqwlqlvllppalfipsteneeqrlasaravprnvqpyvvyeevtnvw
invhdifypfpqsegedelcflranecktgfchlykvtavlksqgydwsepfspgedefk
cpikeeialtsgewevlarhgskiwvneetklvyfqgtkdtplehhlyvvsyeaageivr
lttpgfshscsmsqnfdmfvshyssvstppcvhvyklsgpdddplhkqprfwasmmeaas
cppdyvppeifhfhtrsdvrlygmiykphalqpgkkhptvlfvyggpqvqlvnnsfkgik
ylrlntlaslgyavvvidgrgscqrglrfegalknqmgqveiedqveglqfvaekygfid
lsrvaihgwsyggflslmglihkpqvfkvaiagapvtvwmaydtgyterymdvpennqhg
yeagsvalhveklpnepnrllilhgfldenvhffhtnflvsqliragkpyqlqiypnerh
sircpesgehyevtllhflqeyl

    Sequence, based on observed residues (ATOM records):
    >7jkqD (D:)
ddpaarfqvqkhswdglrsiihgsrkysglivnkaphdfqfvqktdesgphshrlyylgm
pygsrensllyseipkkvrkeallllswkqmldhfqaitsydfhsesglflfqasnslfh
crdggkngfmvspmkpleiktqcsgprmdpkicpadpaffsfinnsdlwvanietgeerr
ltfchqglsnvlddpksagvatfviqeefdrftgywwcptaswegseglktlrilyeevd
esevevihvpspaleerktdsyryprtgsknpkialklaefqtdsqgkivstqekelvqp
fsslfpkveyiaragwtrdgkyawamfldrpqqwlqlvllppalfipsteneeqrlasar
avprnvqpyvvyeevtnvwinvhdifypfpqsegedelcflranecktgfchlykvtavl
ksqgydwsepfspgedefkcpikeeialtsgewevlarhgskiwvneetklvyfqgtkdt
plehhlyvvsyeaageivrlttpgfshscsmsqnfdmfvshyssvstppcvhvyklsgpd
ddplhkqprfwasmmeaascppdyvppeifhfhtrsdvrlygmiykphalqpgkkhptvl
fvyggpqvqlvnnsfkgikylrlntlaslgyavvvidgrgscqrglrfegalknqmgqve
iedqveglqfvaekygfidlsrvaihgwsyggflslmglihkpqvfkvaiagapvtvwma
ydtgyterymdvpennqhgyeagsvalhveklpnepnrllilhgfldenvhffhtnflvs
qliragkpyqlqiypnerhsircpesgehyevtllhflqeyl