PDB entry 7jir

View 7jir on RCSB PDB site
Description: The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, in complex with PLP_Snyder457
Class: hydrolase
Keywords: covid-19, coronavirus, SARS, CoV-2, papain-like protease, IDP51000, Center for Structural Genomics of Infectious Diseases, CSGID, HYDROLASE
Deposited on 2020-07-23, released 2020-08-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-08-05, with a file datestamp of 2020-07-31.
Experiment type: XRAY
Resolution: 2.09 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: papain-like protease
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0DTC1
      • engineered mutation (113)
    Domains in SCOPe 2.07: d7jira1, d7jira2
  • Heterogens: TTT, ZN, CL, MES, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >7jirA (A:)
    snaevrtikvfttvdninlhtqvvdmsmtygqqfgptyldgadvtkikphnshegktfyv
    lpnddtlrveafeyyhttdpsflgrymsalnhtkkwkypqvngltsikwadnnsylatal
    ltlqqielkfnppalqdayyrarageaanfcalilaycnktvgelgdvretmsylfqhan
    ldsckrvlnvvcktcgqqqttlkgveavmymgtlsyeqfkkgvqipctcgkqatkylvqq
    espfvmmsappaqyelkhgtftcaseytgnyqcghykhitsketlycidgalltksseyk
    gpitdvfykensytttik
    

    Sequence, based on observed residues (ATOM records): (download)
    >7jirA (A:)
    vrtikvfttvdninlhtqvvdmsmtygqqfgptyldgadvtkikphnshegktfyvlpnd
    dtlrveafeyyhttdpsflgrymsalnhtkkwkypqvngltsikwadnnsylatalltlq
    qielkfnppalqdayyrarageaanfcalilaycnktvgelgdvretmsylfqhanldsc
    krvlnvvcktcgqqqttlkgveavmymgtlsyeqfkkgvqipctcgkqatkylvqqespf
    vmmsappaqyelkhgtftcaseytgnyqcghykhitsketlycidgalltksseykgpit
    dvfykensyttti