PDB entry 7jhi

View 7jhi on RCSB PDB site
Description: structure of human beta 1,3-n-acetylglucosaminyltransferase 2 iodide- derivative
Deposited on 2020-07-20, released 2020-11-18
The last revision was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: B3GNT2, B3GALT7, B3GNT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NY97 (16-383)
      • initiating methionine (0)
      • expression tag (1-15)
  • Chain 'B':
    Compound: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: B3GNT2, B3GALT7, B3GNT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NY97 (16-383)
      • initiating methionine (0)
      • expression tag (1-15)
  • Chain 'C':
    Compound: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: B3GNT2, B3GALT7, B3GNT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NY97 (16-383)
      • initiating methionine (0)
      • expression tag (1-15)
  • Chain 'D':
    Compound: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
    Species: Homo sapiens [TaxId:9606]
    Gene: B3GNT2, B3GALT7, B3GNT1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9NY97 (16-383)
      • initiating methionine (0)
      • expression tag (1-15)
  • Heterogens: NAG, MG, UDP, IOD, CL, PG4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jhiA (A:)
mhhhhhhhhenlyfqgsssqekngkgeviipkekfwkistppeaywnreqeklnrqynpi
lsmltnqtgeagrlsnishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnysllid
qpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtppednhpd
lsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvfvnth
hilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggflysg
hlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnicsyvdlm
lvhsrkpqemidiwsqlqsahlkc

    Sequence, based on observed residues (ATOM records):
    >7jhiA (A:)
peaywnreqeklnrqynpilsmishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrn
ysllidqpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtpp
ednhpdlsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgddd
vfvnthhilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggg
gflysghlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnic
syvdlmlvhsrkpqemidiwsqlqsahlkc

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7jhiB (B:)
mhhhhhhhhenlyfqgsssqekngkgeviipkekfwkistppeaywnreqeklnrqynpi
lsmltnqtgeagrlsnishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnysllid
qpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtppednhpd
lsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvfvnth
hilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggflysg
hlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnicsyvdlm
lvhsrkpqemidiwsqlqsahlkc

    Sequence, based on observed residues (ATOM records):
    >7jhiB (B:)
eaywnreqeklnrqynpilsishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnys
llidqpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtpped
nhpdlsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvf
vnthhilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggf
lysghlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnicsy
vdlmlvhsrkpqemidiwsqlqsahlkc

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7jhiC (C:)
mhhhhhhhhenlyfqgsssqekngkgeviipkekfwkistppeaywnreqeklnrqynpi
lsmltnqtgeagrlsnishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnysllid
qpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtppednhpd
lsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvfvnth
hilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggflysg
hlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnicsyvdlm
lvhsrkpqemidiwsqlqsahlkc

    Sequence, based on observed residues (ATOM records):
    >7jhiC (C:)
peaywnreqeklnrqynpilsmnishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcr
nysllidqpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtp
pednhpdlsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdd
dvfvnthhilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyagg
ggflysghlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknni
csyvdlmlvhsrkpqemidiwsqlqsahlkc

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7jhiD (D:)
mhhhhhhhhenlyfqgsssqekngkgeviipkekfwkistppeaywnreqeklnrqynpi
lsmltnqtgeagrlsnishlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnysllid
qpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtppednhpd
lsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvfvnth
hilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggflysg
hlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdieeknknnicsyvdlm
lvhsrkpqemidiwsqlqsahlkc

    Sequence, based on observed residues (ATOM records):
    >7jhiD (D:)
eaywnreqeklnrqynpilshlnycepdlrvtsvvtgfnnlpdrfkdfllylrcrnysll
idqpdkcakkpflllaiksltphfarrqaireswgqesnagnqtvvrvfllgqtppednh
pdlsdmlkfesekhqdilmwnyrdtffnlslkevlflrwvstscpdtefvfkgdddvfvn
thhilnylnslsktkakdlfigdvihnagphrdkklkyyipevvysglyppyaggggfly
sghlalrlyhitdqvhlypiddvytgmclqklglvpekhkgfrtfdnknnicsyvdlmlv
hsrkpqemidiwsqlqsahlkc