PDB entry 7jgh

View 7jgh on RCSB PDB site
Description: cryo-em structure of p. falciparum var2csa nf54 core in complex with csa at 3.36 a
Deposited on 2020-07-19, released 2021-01-13
The last revision was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: EM
Resolution: 3.36 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Erythrocyte membrane protein 1
    Species: Plasmodium falciparum (isolate NF54) [TaxId:5843]
    Gene: PFNF54_03544
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ASG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7jghA (A:)
    tgmdkssiankieaylgaksddskidqslkadpsevqyygsggdgyylrknickitvnhs
    dsgtndpcdripppygdndqwkcaiilskvsekpenvfvpprrqrmcinnleklnvdkir
    dkhafladvlltarnegerivqnhpdtnssnvcnalersfadiadiirgtdlwkgtnsnl
    eqnlkqmfakirendkvlqdkypkdqnyrklredwwnanrqkvwevitcgarsndllikr
    gwrtsgksngdnklelcrkcghyeekvptkldyvpqflrwltewiedfyrekqnliddme
    rhreectsedhkskegtsycstckdkckkycecvkkwksewenqknkytelyqqnknets
    qkntsryddyvkdffkkleanysslenyikgdpyfaeyatklsfilnssdannpsekiqk
    nndevcncnesgiasveqeqisdpssnktcithssikankkkvckhvklgvrendkdlrv
    cviehtslsgvencccqdflrilqencsdnksgsssngscnnknqeaceknlekvlaslt
    ncykcdkckseqskknnknwiwkkssgkegglqkeyantiglpprtqslclvvcldekgk
    ktqelknirtnsellkewiiaafhegknlkpshekknddngkklckaleysfadygdlik
    gtsiwdneytkdlelnlqkifgklfrkyikknntaeqdtsyssldelreswwntnkkyiw
    lamkhgagmnsttccgdgsvtgsgsscddiptidlipqylrflqewvehfckqrqekvkp
    viencksckesggtcngecktecknkcevykkfiedckggdgtagsswvkrwdqiykrys
    kyiedakrnrkagtkncgpssttnaaenkcvqsdidsffkhlidiglttpssylsivldd
    nicgadkapwttyttytttekcnketdksklqqcntavvvnvpsplgntphgykyacqck
    iptneetcddrkeymnqwscgsartmkrgykndnyelckyngvdvkpttvrsnssklddk
    dvtffnlfeqwnkeiqyqieqymtntkiscnneknvlsrvsdeaaqpkfsdnerdrnsit
    hedknckekckcyslwiekindqwdkqkdnynkfqrkqiydankgsqnkkvvslsnflff
    scweeyiqkyfngdwskiknigsdtfeflikkcgndsgdgetifseklnnaekkckenes
    tnnkmkssetscdcsepiyirgcqpkiydgkifpgkggekqwickdtiihgdtngacipp
    rtqnlcvgelwdkryggrsnikndtkeslkqkiknaiqketellyeyhdkgtaiisrnpm
    kgqkekeeknndsnglpkgfchavqrsfidyknmilgtsvniyeyigklqedikkiiekg
    ttkqngktvgsgaenvnawwkgiegemwdavrcaitkinkkqkkngtfsidecgifpptg
    ndedqsvswfkewseqfcierlqyeknirdactnngqgdkiqgdckrkceeykkyisekk
    qewdkqktkyenkyvgksasdllkenypecisanfdfifndnieyktyypygdyssicsc
    eqvkyyeynnaekknnkslchekgndrtwskkyikklengrtlegvyvpprrqqlclyel
    fpiiiknknditnakkelletlqivaereayylwkqyhahndttylahkkaccairgsfy
    dlediikgndlvhdeytkyidsklneifdssnkndietkrartdwweneaiavpnitgan
    ksdpktirqlvwdamqsgvrkaideekekkkpnenfppcmgvqhigiakpqfirwleewt
    nefcekytkyfedmksncnlrkgaddcddnsnieckkacanytnwlnpkriewngmsnyy
    nkiyrksnkesedgkdysmimeptvidylnkrcngeingnyiccscknigenstsgtvnk
    klqkketqcednkgpldlmnkvlnkmdpkysehkmkctevylehveeqlkeidnaikdyk
    lypldrcfddkskmkvcdligdaigckhktkldeldewndvdmrdpynkykgvlipprrr
    qlcfsrivrgpanlrnlkefkeeilkgaqsegkflgnyynedkdkekaleamknsfydye
    yiikgsdmltniqfkdikrkldrlleketnntekvddwwetnkksiwnamlcgykksgnk
    iidpswctipttetppqflrwikewgtnvciqkeehkeyvkskcsnvtnlgaqesesknc
    tseikkyqewsrkrsiqweaisegykkykgmdefkntfknikepdanepnaneylkkhcs
    kcpcgfndmqeitkytnigneafkqikeqvdipaeledviyrlkhheydkgndyicnkyk
    ninvnmkknnddtwtdlvknssdinkgvllpprrknlflkidesdickykrdpklfkdfi
    yssaiseverlkkvygeaktkvvhamkysfadigsiikgddmmennssdkigkilgdgvg
    qnekrkkwwdmnkyhiwesmlcgykhaygnisendrkmldipnnddehqflrwfqewten
    fctkrnelyenmvtacnsakcntsngsvdkkecteacknysnfilikkkeyqslnsqydm
    nyketkaekkespeyfkdkcngecsclseyfkdetrwknpyetlddtevknncmckpppp
    asnngtkhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >7jghA (A:)
    sevqyygsggdgyylrknickitvnhsdsgtndpcdvpprrqrmcinnvdkirdkhafla
    dvlltarnegerivqnhpdtnssnvcnalersfadiadiirgtdlwkgtnsnleqnlkqm
    fakirendkvlyrklredwwnanrqkvwevitcgarsndlelcrkcghyeekvptkldyv
    pqflrwltewiedfyrekqnliddmerhreectsycstckdkckkycecvkkwksewenq
    knkytelyqqnktsryddyvkdffkkleaknnknwiwkkssgkegglqkeyantiglppr
    tqslclvvllkewiiaafhegknlkpshekkndgkklckaleysfadygdlikgtsiwdn
    eytkdlelnlqkifgklfssldelreswwntnkkyiwlamkhgagmnsttgsgsscddip
    tidlipqylrflqewvehfckqrqekvkpviencksccktecknkcevykkfiedckggd
    gtagsswvkrwdqiykryskyiedakrnrkagtknccvqsdidsffkhlidiglttpssy
    lsivlddnicgadkapwttyttytttntavvvnvpsplgntphgykyacqckiptneetc
    ddrkeymnqwsckndnyelckyngvdvkpttvrsnssklddkdvtffnlfeqwnkeiqyq
    ieqymtntnckekckcyslwiekindqwdkqkdnynkfqrkqiydkvvslsnflffscwe
    eyiqkyfngdwskiknigsdtfeflikkcgndsgdgetifseklnnaekkckenestscd
    csepiyirgcqpkiydgkifgekqwicgacipprtqnlcvgelslkqkiknaiqketell
    yeyhdkgtaiisrnpmkgqknndsnglpkgfchavqrsfidyknmilgtsvniyeyigkl
    qedikkiinawwkgiegemwdavrcaitkinkkqkkngtfsidecgifpptgndedqsvs
    wfkewseqfcierlqyeknirdactndkiqgdckrkceeykkyisekkqewdkqktkyen
    kyvgksasdllkenypecisanfdfifndnieyktyypygdyssicsceqvkyyeynnae
    kknnkslchekgndrtwskkyikegvyvpprrqqlclyelfpiiiknknditnakkelle
    tlqivaereayylwkqyhahndttylahkkaccairgsfydlediikgndlvhdeytkyi
    dsklneifdssnkndietkrartdwweneapktirqlvwdamqsgvrkaidenenfppcm
    gvqhigiakpqfirwleewtnefcekytkyfedmksncieckkacanytnwlnpkriewn
    gmsnyynkiyrksnkesedgkdysmimeptvidylnkrcngeingnyiccscknigenst
    sgtvnkklqkketqcednkgpldlmnkvlnkmdpkysehkm