PDB entry 7ef8

View 7ef8 on RCSB PDB site
Description: crystal structure of mouse mutyh in complex with dna containing ap site analogue:8-oxog (form i)
Deposited on 2021-03-21, released 2021-06-23
The last revision was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenine DNA glycosylase
    Species: Mus musculus [TaxId:10090]
    Gene: MUTYH, MYH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q99P21 (5-457)
      • expression tag (0-4)
  • Chain 'B':
    Compound: DNA (5'-d(*tp*gp*ap*gp*ap*cp*(8og)p*gp*gp*gp*ap*cp*t)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'C':
    Compound: DNA (5'-d(*tp*ap*gp*tp*cp*cp*cp*(3dr)p*gp*tp*cp*tp*c)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: 3DR, 8OG, SF4, ZN, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7ef8A (A:)
gpgyqsldglakqkreellqasvspyhlfsdvadvtafrsnllswydqekrdlpwrnlak
eeansdrrayavwvsevmlqqtqvatvidyytrwmqkwpklqdlasasleevnqlwsglg
yysrgrrlqegarkvveelgghmprtaetlqqllpgvgrytagaiasiafdqvtgvvdgn
vlrvlcrvraigadptstlvshhlwnlaqqlvdparpgdfnqaamelgatvctpqrplcs
hcpvqslcrayqrvqrgqlsalpgrpdieecalntrqcqlcltssspwdpsmgvanfprk
asrrppreeysatcvveqpgaiggplvllvqrpdsgllaglwefpsvtlepseqhqhkal
lqelqrwcgplpairlqhlgevihifshikltyqvyslaldqapastappgarwltweef
cnaavstamkkvfrmyedhrqgtrkgskrsqvcppssr

    Sequence, based on observed residues (ATOM records):
    >7ef8A (A:)
svspyhlfsdvadvtafrsnllswydqekrdlpwrnlakeeansdrrayavwvsevmlqq
tqvatvidyytrwmqkwpklqdlasasleevnqlwsglgyysrgrrlqegarkvveelgg
hmprtaetlqqllpgvgrytagaiasiafdqvtgvvdgnvlrvlcrvraigadptstlvs
hhlwnlaqqlvdparpgdfnqaamelgatvctpqrplcshcpvqslcrayqrvqeecacq
lcltssspwdpsmgvanfprkasrrppreeysatcvveqpgaiggplvllvqrpdsglla
glwefpsvtlepseqhqhkallqelqrwcgplpairlqhlgevihifshikltyqvysla
ldqapastappgarwltweefcnaavstamkkvfrmyedhrq

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.