PDB entry 7e53

View 7e53 on RCSB PDB site
Description: Crystal structure of sfGFP complexed with the nanobody nb2 at 2.2 Angstron resolution
Class: fluorescent protein
Keywords: Aequorea victoria, Camelus bactrianus, FLUORESCENT PROTEIN
Deposited on 2021-02-16, released 2021-10-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-10-13, with a file datestamp of 2021-10-08.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Green fluorescent protein
    Species: Aequorea victoria [TaxId:6100]
    Gene: GFP
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A059PIQ0 (4-233)
      • expression tag (0-3)
      • conflict (31)
      • chromophore (67)
      • conflict (73)
      • conflict (81)
      • conflict (207)
    Domains in SCOPe 2.08: d7e53a1, d7e53a2
  • Chain 'B':
    Compound: Green fluorescent protein's nanobody nb2
    Species: Camelus bactrianus [TaxId:9837]
    Database cross-references and differences (RAF-indexed):
    • PDB 7E53 (0-127)
    Domains in SCOPe 2.08: d7e53b1, d7e53b2
  • Heterogens: CRO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7e53A (A:)
gpgskgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwp
tlvttlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdt
lvnrielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvql
adhyqqntpigdgpvllpdnhylstqsvlskdpnekrdhmvllefvtaagithg

    Sequence, based on observed residues (ATOM records): (download) 
    >7e53A (A:)
skgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlv
ttlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvn
rielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladh
yqqntpigdgpvllpdnhylstqsvlskdpnekrdhmvllefvtaagit

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7e53B (B:)
qvqlqesgggsvqaggslrlscaasgptyssyfmawfrqapgmeregvaassydgsttly
adsvkgrftisqgnakntkflllnnlepedtaiyycalrrrgwsntsgwkqpgwydywgq
gtqvtvss

    Sequence, based on observed residues (ATOM records): (download) 
    >7e53B (B:)
qvqlqesgggsvqaggslrlscaasgptyssyfmawfrqapgmeregvaassydgsttly
adsvkgrftisqgnakntkflllnnlepedtaiyycalrrrgwsntsgwkqpgwydywgq
gtqvtv