PDB entry 7e23

View 7e23 on RCSB PDB site
Description: sars-cov-2 spike in complex with the ca521 neutralizing antibody fab (focused refinement on fab-rbd)
Deposited on 2021-02-04, released 2021-05-05
The last revision was dated 2021-05-05, with a file datestamp of 2021-04-30.
Experiment type: EM
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spike protein S1
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: CA521 Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7E23
  • Chain 'C':
    Compound: CA521 Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7E23
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >7e23A (A:)
tnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcf
tnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyl
yrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvv
lsfellhapatvcg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7e23B (B:)
evqlqqwgagllkpsetlsltcavyggsfsgyywswirqppgkglewigevnhsgstnyn
pslksrvtisvdtsknqlslklnsvtaadtavyycargntmvrgviipfeywdkgtlvtv
ssastkgpsvfplapcsrstsestaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
ssglyslssvvtvpssslgtktytcnvdhkpsntkvdkrveskygppcppcpapeaaggp
svflfppkpkdtlmisrtpevtcvvvdvsqedpevqfnwyvdgvevhnaktkpreeqfns
tyrvvsvltvlhqdwlngkeykckvsnkglpssiektiskakgqprepqvytlppsqeem
tknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflysrltvdksrwq
egnvfscsvmhealhnhytqkslslslg

    Sequence, based on observed residues (ATOM records):
    >7e23B (B:)
gllkpsetlsltcavyggsfsgyywswirqppgkglewigevnhsgstnynpslksrvti
svdtsknqlslklnsdtavyycargntmvrgviipfeywdkgtlvtv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7e23C (C:)
eivltqspatlslspgeratlscrasqsvssylawyqqkpgqaprlliydasnratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwpltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >7e23C (C:)
ivltqspatlslspgeratlscrasvssylawyqqkpgqaprlliydasnratgiparfs
gsgsgtdftltisslepedfavyycqqrsnwpltfgggtkve