PDB entry 7e1j

View 7e1j on RCSB PDB site
Description: Crystal structure of Pr55Gag-matrix domain in complex with IP6 in space group C121
Class: viral protein
Keywords: HIV-1, Matrix protein, Myo-inositol hexakisphosphate, Serial femtosecond X-ray crystallography, Ambient-temperature crystallography, VIRAL PROTEIN
Deposited on 2021-02-01, released 2021-08-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-08-04, with a file datestamp of 2021-07-30.
Experiment type: XRAY
Resolution: 2.72 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1ja_
  • Chain 'B':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1jb1, d7e1jb2
  • Chain 'C':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1jc1, d7e1jc2
  • Chain 'D':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1jd1, d7e1jd2
  • Chain 'E':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1je_
  • Chain 'F':
    Compound: capsid protein p24
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot T2CJ20 (1-116)
      • expression tag (0)
    Domains in SCOPe 2.08: d7e1jf_
  • Heterogens: IHP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7e1jA (A:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jA (A:)
mgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrqi
lgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7e1jB (B:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jB (B:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7e1jC (C:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jC (C:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7e1jD (D:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jD (D:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7e1jE (E:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jE (E:)
rasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrqilgq
lqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnks

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >7e1jF (F:)
smgarasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrq
ilgqlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskkkaq

    Sequence, based on observed residues (ATOM records): (download) 
    >7e1jF (F:)
arasvlsggeldkwekirlrpggkkqyklkhivwasrelerfavnpglletsegcrqilg
qlqpslqtgseelrslyntiavlycvhqridvkdtkealdkieeeqnkskk