PDB entry 7dzq

View 7dzq on RCSB PDB site
Description: cryo-em structure of patched in lipid nanodisc - the wildtype
Deposited on 2021-01-25, released 2021-06-30
Made obsolete by 7v6y on 2021-09-22

The last revision was dated 2021-09-22, with a file datestamp of 2021-09-17.
Experiment type: EM
Resolution: 3.6 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein patched homolog 1,Protein patched homolog 1
    Species: Mus musculus [TaxId:10090]
    Gene: PTCH1, PTCH
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q61115 (3-615)
      • initiating methionine (0)
      • expression tag (1-2)
    • Uniprot Q61115 (616-1081)
      • expression tag (1082-1089)
  • Heterogens: CLR, NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7dzqA (A:)
mgsasagnaagalgrqagggrrrrtggphraapdrdylhrpsycdaafaleqiskgkatg
rkaplwlrakfqrllfklgcyiqkncgkflvvgllifgafavglkaanletnveelwvev
ggrvsrelnytrqkigeeamfnpqlmiqtpkeeganvltteallqhldsalqasrvhvym
ynrqwklehlcyksgelitetgymdqiieylypcliitpldcfwegaklqsgtayllgkp
plrwtnfdplefleelkkinyqvdsweemlnkaevghgymdrpclnpadpdcpatapnkn
stkpldvalvlnggcqglsrkymhwqeelivggtvknatgklvsahalqtmfqlmtpkqm
yehfrgydyvshinwnedraaaileawqrtyvevvhqsvapnstqkvlpfttttlddilk
sfsdvsvirvasgyllmlayacltmlrwdcsksqgavglagvllvalsvaaglglcslig
isfnaattqvlpflalgvgvddvfllahafsetgqnkripfedrtgeclkrtgasvalts
isnvtaffmaalipipalrafslqaavvvvfnfamvllifpailsmdlyrredrrldifc
cftspcvsrviqvepqeppctkwtlssfaekhyapfllkpkakvvvillflgllgvslyg
ttrvrdgldltdivpretreydfiaaqfkyfsfynmyivtqkadypniqhllydlhksfs
nvkyvmleenkqlpqmwlhyfrdwlqglqdafdsdwetgrimpnnykngsddgvlaykll
vqtgsrdkpidisqltkqrlvdadgiinpsafyiyltawvsndpvayaasqanirphrpe
wvhdkadympetrlripaaepieyaqfpfylnglrdtsdfveaiekvrvicnnytslgls
sypngypflfweqyislrhwlllsisvvlactflvcavfllnpwtagiivmvlalmtvel
fgmmgligiklsavpvviliasvgigveftvhvalafltaigdknhramlalehmfapvl
dgavstllgvlmlagsefdfivryffavlailtvlgvlnglvllpvllsffgpcpevspa
ngtlevlfqg

    Sequence, based on observed residues (ATOM records):
    >7dzqA (A:)
kaplwlrakfqrllfklgcyiqkncgkflvvgllifgafavglkaanletnveelwvevg
grvsrelnytrqkigeeamfnpqlmiqtpkeeganvltteallqhldsalqasrvhvymy
nrqwklehlcyksgeymdqiieylypcliitpldcfwegaklqsgtayllgkpplrwtnf
dplefleelkkinyqvdsweemlnkaevghgymdrpclnpadpdcpatapnknstkpldv
alvlnggcqglsrkymhwqeelivggtvknatgklvsahalqtmfqlmtpkqmyehfrgy
dyvshinwnedraaaileawqrtyvevvhqsvapnstqkvlpfttttlddilksfsdvsv
irvasgyllmlayacltmlrwdcsksqgavglagvllvalsvaaglglcsligisfnaat
tqvlpflalgvgvddvfllahafsetgqnkripfedrtgeclkrtgasvaltsisnvtaf
fmaalipipalrafslqaavvvvfnfamvllifpailsmdlyrredrrldifckwtlssf
aekhyapfllkpkakvvvillflgllgvslygttrvrdgldltdivpretreydfiaaqf
kyfsfynmyivtqkadypniqhllydlhksfsnvkyvmleenkqlpqmwlhyfrdwlqgl
qdafdsdwetgrimpnnykngsddgvlaykllvqtgsrdkpidisqltkqrlvdadgiin
psafyiyltawvsndpvayaasqanirphrpewvhdkadympetrlripaaepieyaqfp
fylnglrdtsdfveaiekvrvicnnytslglssypngypflfweqyislrhwlllsisvv
lactflvcavfllnpwtagiivmvlalmtvelfgmmgligiklsavpvviliasvgigve
ftvhvalafltaigdknhramlalehmfapvldgavstllgvlmlagsefdfivryffav
lailtvlgvlnglvllpvllsffgpc