PDB entry 7dwo

View 7dwo on RCSB PDB site
Description: crystal structure of vibrio fischeri darr in complex with dna reveals the transcriptional activation mechanism of lttr family members
Deposited on 2021-01-17, released 2021-07-07
The last revision was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: XRAY
Resolution: 2.61 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Predicted DNA-binding transcriptional regulator
    Species: Aliivibrio fischeri ES114 [TaxId:312309]
    Gene: yjiE, VF_1545
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5E4K6 (0-292)
      • engineered mutation (201)
  • Chain 'B':
    Compound: Predicted DNA-binding transcriptional regulator
    Species: Aliivibrio fischeri ES114 [TaxId:312309]
    Gene: yjiE, VF_1545
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5E4K6 (0-292)
      • engineered mutation (201)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7dwoA (A:)
mnveskwledflvlakvknfsqaaelrnvtqpafsrrirlledtvgaelvdrkskpielt
psgklfritartlvnqieagisqisdlsqlggnvvqvaaahslatslipkmqqafdegdy
kpilsveaidvdeatkelregacdillafdddilrlppyqsqliaktellpvsacdemgk
piydfisqgavpwltysstsyigrqveiireqvaltpifsssmtdmlkilvlnkqgiawl
paysiqeelaqkkvaiigeqslrlpieyyayryqarlhpagekvwsilcnldt

    Sequence, based on observed residues (ATOM records):
    >7dwoA (A:)
mnveskwledflvlakvknfsqaaelrnvtqpafsrrirlledtvgaelvdrkskpielt
psgklfritartlvnqieagisqisdlsqlggnvvqvaaahslatslipkmqqafdegdy
kpilsveaidvdeatkelregacdillafdddilrlppyqsqliaktellpvsacdemgk
piydfisqgavpwltysstsyigrqveiireqvaltpifsssmtdmlkilvlnkqgiawl
paysiqeelaqkkvaiigeqslrlpieyyayryqarlhpagekvwsilcnld

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7dwoB (B:)
mnveskwledflvlakvknfsqaaelrnvtqpafsrrirlledtvgaelvdrkskpielt
psgklfritartlvnqieagisqisdlsqlggnvvqvaaahslatslipkmqqafdegdy
kpilsveaidvdeatkelregacdillafdddilrlppyqsqliaktellpvsacdemgk
piydfisqgavpwltysstsyigrqveiireqvaltpifsssmtdmlkilvlnkqgiawl
paysiqeelaqkkvaiigeqslrlpieyyayryqarlhpagekvwsilcnldt

    Sequence, based on observed residues (ATOM records):
    >7dwoB (B:)
mnveskwledflvlakvknfsqaaelrnvtqpafsrrirlledtvgaelvdrkskpielt
psgklfritartlvnqieagisqisdlsqlggnvvqvaaahslatslipkmqqafdegdy
kpilsveaidvdeatkelregacdillafdddilrlppyqsqliaktellpvsacdemgk
piydfisqgavpwltysstsyigrqveiireqvaltpifsssmtdmlkilvlnkqgiawl
paysiqeelaqkkvaiigeqslrlpieyyayryqarlhpagekvwsilcnld