PDB entry 7dtc

View 7dtc on RCSB PDB site
Description: voltage-gated sodium channel nav1.5-e1784k
Deposited on 2021-01-04, released 2021-03-24
The last revision was dated 2021-03-24, with a file datestamp of 2021-03-19.
Experiment type: EM
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sodium channel protein type 5 subunit alpha
    Species: Homo sapiens [TaxId:9606]
    Gene: SCN5A
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7dtcA (A:)
    maswshpqfekgggarggsgggswshpqfekgfdykddddkgtmanfllprgtssfrrft
    reslaaiekrmaekqargsttlqesreglpeeeaprpqldlqaskklpdlygnppqelig
    epledldpfystqktfivlnkgktifrfsatnalyvlspfhpirraavkilvhslfnmli
    mctiltncvfmaqhdpppwtkyveytftaiytfeslvkilargfclhaftflrdpwnwld
    fsviimayttefvdlgnvsalrtfrvlralktisvisglktivgaliqsvkkladvmvlt
    vfclsvfaliglqlfmgnlrhkcvrnftalngtngsveadglvwesldlylsdpenyllk
    ngtsdvllcgnssdagtcpegyrclkagenpdhgytsfdsfawaflalfrlmtqdcwerl
    yqqtlrsagkiymiffmlviflgsfylvnlilavvamayeeqnqatiaeteekekrfqea
    memlkkehealtirgvdtvsrsslemsplapvnsherrskrrkrmssgteecgedrlpks
    dsedgpramnhlsltrglsrtsmkprssrgsiftfrrrdlgseadfaddenstagesesh
    htsllvpwplrrtsaqgqpspgtsapghalhgkknstvdcngvvsllgagdpeatspgsh
    llrpvmlehppdtttpseepggpqmltsqapcvdgfeepgarqralsavsvltsaleele
    esrhkcppcwnrlaqryliweccplwmsikqgvklvvmdpftdltitmcivlntlfmale
    hynmtsefeemlqvgnlvftgiftaemtfkiialdpyyyfqqgwnifdsiivilslmelg
    lsrmsnlsvlrsfrllrvfklakswptlntlikiignsvgalgnltlvlaiivfifavvg
    mqlfgknyselrdsdsgllprwhmmdffhafliifrilcgewietmwdcmevsgqslcll
    vfllvmvignlvvlnlflalllssfsadnltapdedremnnlqlalariqrglrfvkrtt
    wdfccgllrqrpqkpaalaaqgqlpsciatpysppppetekvpptrketrfeegeqpgqg
    tpgdpepvcvpiavaesdtddqeedeenslgteeesskqqesqpvsggpeappdsrtwsq
    vsatasseaeasasqadwrqqwkaepqapgcgetpedscsegstadmtntaelleqipdl
    gqdvkdpedcftegcvrrcpccavdttqapgkvwwrlrktcyhivehswfetfiifmill
    ssgalafediyleerktikvlleyadkmftyvfvlemllkwvaygfkkyftnawcwldfl
    ivdvslvslvantlgfaemgpikslrtlralrplralsrfegmrvvvnalvgaipsimnv
    llvclifwlifsimgvnlfagkfgrcinqtegdlplnytivnnksqceslnltgelywtk
    vkvnfdnvgagylallqvatfkgwmdimyaavdsrgyeeqpqweynlymyiyfvifiifg
    sfftlnlfigviidnfnqqkkklggqdifmteeqkkyynamkklgskkpqkpiprplnky
    qgfifdivtkqafdvtimfliclnmvtmmvetddqspekinilakinllfvaiftgeciv
    klaalrhyyftnswnifdfvvvilsivgtvlsdiiqkyffsptlfrvirlarigrilrli
    rgakgirtllfalmmslpalfniglllflvmfiysifgmanfayvkweagiddmfnfqtf
    ansmlclfqittsagwdgllspilntgppycdptlpnsngsrgdcgspavgilffttyii
    isflivvnmyiaiilenfsvateestkplseddfdmfyeiwekfdpeatqfieysvlsdf
    adalseplriakpnqislinmdlpmvsgdrihcmdilfaftkrvlgesgemdalkiqmee
    kfmaanpskisyepitttlrrkheevsamviqrafrrhllqrslkhasflfrqqagsgls
    eedaperegliayvmsenfsrplgppssssisstsfppsydsvtratsdnlqvrgsdysh
    sedladfppspdrdresiv
    

    Sequence, based on observed residues (ATOM records):
    >7dtcA (A:)
    pirraavkilvhslfnmlimctiltncvfmaqhdpppwtkyveytftaiytfeslvkila
    rgfclhaftflrdpwnwldfsviimayttefvdlgnvsalrtfrvlralktisvisglkt
    ivgaliqsvkkladvmvltvfclsvfaliglqlfmgnlrhkcvrnftalngtngsveadg
    lvwesldlylsdpenyllkngtsdvllcgnssdagtcpegyrclkagenpdhgytsfdsf
    awaflalfrlmtqdcwerlyqqtlrsagkiymiffmlviflgsfylvnlilavvamayee
    qnqatiaeteeccplwmsikqgvklvvmdpftdltitmcivlntlfmalehynmtsefee
    mlqvgnlvftgiftaemtfkiialdpyyyfqqgwnifdsiivilslmelglsrmsnlsvl
    rsfrllrvfklakswptlntlikiignsvgalgnltlvlaiivfifavvgmqlfgknyse
    lrdsdsgllprwhmmdffhafliifrilcgewietmwdcmevsgqslcllvfllvmvign
    lvvlnlflalllssfsagkvwwrlrktcyhivehswfetfiifmillssgalafediyle
    erktikvlleyadkmftyvfvlemllkwvaygfkkyftnawcwldflivdvslvslvant
    lgfaemgpikslrtlralrplralsrfegmrvvvnalvgaipsimnvllvclifwlifsi
    mgvnlfagkfgrcinqtegdlplnytivnnksqceslnltgelywtkvkvnfdnvgagyl
    allqvatfkgwmdimyaavdsrgyeeqpqweynlymyiyfvifiifgsfftlnlfigvii
    dnfnqqkkklggqdifmteeqkkyynamkklgskkpqkpiprplnkyqgfifdivtkqaf
    dvtimfliclnmvtmmvetddqspekinilakinllfvaiftgecivklaalrhyyftns
    wnifdfvvvilsivgtvlsdiiqkyffsptlfrvirlarigrilrlirgakgirtllfal
    mmslpalfniglllflvmfiysifgmanfayvkweagiddmfnfqtfansmlclfqitts
    agwdgllspilntgppycdptlpnsngsrgdcgspavgilffttyiiisflivvnmyiai
    ilenfsvatee