PDB entry 7die

View 7die on RCSB PDB site
Description: Crystal structure of M. penetrans Ferritin
Class: metal binding protein
Keywords: Ferritin, Iron uptake, Iron release., METAL BINDING PROTEIN
Deposited on 2020-11-19, released 2021-05-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-05-26, with a file datestamp of 2021-05-21.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7diea_
  • Chain 'B':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dieb_
  • Chain 'C':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7diec_
  • Chain 'D':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7died_
  • Chain 'E':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7diee_
  • Chain 'F':
    Compound: Ferritin
    Species: Mycoplasma penetrans (strain HF-2) [TaxId:272633]
    Gene: MYPE2930
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dief_
  • Heterogens: FE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7dieA (A:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieA (A:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7dieB (B:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieB (B:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7dieC (C:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieC (C:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7dieD (D:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieD (D:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7dieE (E:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieE (E:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >7dieF (F:)
msdsvfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsah
msrlvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllak
dfetfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkklkkseydddhded

    Sequence, based on observed residues (ATOM records): (download) 
    >7dieF (F:)
svfnkderimdlvskhynvelcaanlyfhlatvskalgydnvaaffvkmgsdkqsahmsr
lvkymmkvdsilkinqisvpelvsfetiqevldaalkmeskvresvknvteisllakdfe
tfermqwfvkdsiedleeisdvwtyvhspnvnlinienivgkkl