PDB entry 7did

View 7did on RCSB PDB site
Description: mycoplasma genitalium rnase r in complex with ribose methylated single-stranded rna
Deposited on 2020-11-18, released 2021-03-17
The last revision was dated 2021-05-19, with a file datestamp of 2021-05-14.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease R
    Species: Mycoplasma genitalium G37 [TaxId:243273]
    Gene: rnr, vacB, MG104
    Database cross-references and differences (RAF-indexed):
    • Uniprot P47350 (Start-746)
      • engineered mutation (305)
  • Chain 'C':
    Compound: RNA (5'-r(*ap*ap*ap*a)-3')
    Species: Mycoplasma genitalium G37, synthetic [TaxId:243273]
  • Heterogens: MG, A2M, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7didA (A:)
mghhhhhhhhhhssghiddddkmkvltelqkqiftivkkengkpippgivvrmmenspnf
pgkhliyraiddlldwailrkaggvtnqllvnyepaeplldkklqgiltlgnknsgfirs
ldddktvyyvhysnltgaldgdlvefckldkpqfgdkfdaavitilkrarilyagnflvd
qnefaleykivadnprfyltmivnpdsipnnlasntkiafqideydpdnnlckvsvqqvl
gnnddplinikaimldnsivfetndvveqhanklsfdteeqhkayrqdltdlafvtvdpt
tskdladaiyvktiptgfvlyvaiadvahyvnrnseidieakhktssiylpghyvvpmlp
eqlsnqlcslnpaqkryvvvceisfdnqgriktnklypatiisknrfsydqvnkwlnnks
elncdetvinslkaaftlsdliqaqrqkrgtidlshketeivvdehyfpikinflvhdka
etmienlmvvanetvawvltnnkialpyrvhprpskkklqslietvgelnitkpqfnldt
vtssqiaswlnenkdnpsyeifvilllrtlgkafysvnplmhfsigsnhythftspirry
idltihrllwmhlftpdqftdnerdqlkqelekiadtvndteikiincernandylttll
lskqigktfsgfisaitsfgifmrmdennfdglikittipddffifekekmvlkgrktnk
vykigdrleaklseidfiqkrailtli

    Sequence, based on observed residues (ATOM records):
    >7didA (A:)
lqgiltlgnknsgfirsldddktvyyvhysnltgaldgdlvefckldkpqfgdkfdaavi
tilkrarilyagnflvdqnefaleykivadnprfyltmivnpdsipnnlasntkiafqid
eydpdnnlckvsvqqvlgnnddplinikaimldnsivfetndvveqhanklsfdteeqhk
ayrqdltdlafvtvdpttskdladaiyvktiptgfvlyvaiadvahyvnrnseidieakh
ktssiylpghyvvpmlpeqlsnqlcslnpaqkryvvvceisfdnqgriktnklypatiis
knrfsydqvnkwlnnkselncdetvinslkaaftlsdliqaqrqkrgtidlshketeivv
dehyfpikinflvhdkaetmienlmvvanetvawvltnnkialpyrvhprpskkklqsli
etvgelnitkpqfnldtvtssqiaswlnenkdnpsyeifvilllrtlgkafysvnplmhf
sigsnhythftspirryidltihrllwmhlftpdqftdnerdqlkqelekiadtvndtei
kiincernandylttlllskqigktfsgfisaitsfgifmrmdennfdglikittipddf
fifekekmvlkgrktnkvykigdrleaklseidfiqkrailtli

  • Chain 'C':
    No sequence available.