PDB entry 7dft

View 7dft on RCSB PDB site
Description: Crystal structure of Xanthomonas oryzae ClpP
Class: hydrolase
Keywords: Caseinolytic protease P, Clp protease, HYDROLASE
Deposited on 2020-11-09, released 2021-05-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-28, with a file datestamp of 2021-07-23.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dfta_
  • Chain 'B':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dftb_
  • Chain 'C':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dftc1
  • Chain 'D':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dftd_
  • Chain 'E':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dfte_
  • Chain 'F':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dftf1
  • Chain 'G':
    Compound: ATP-dependent Clp protease proteolytic subunit
    Species: Xanthomonas oryzae [TaxId:347]
    Gene: clpP, ADT25_23080, ADT27_15185, EYR26_04825
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7dftg_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7dftA (A:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftA (A:)
vpmvvaydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiyinspggvv
tagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmihqplggfqg
qatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqayglvdqvle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7dftB (B:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftB (B:)
vpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiy
inspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmih
qplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqay
glvdqvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >7dftC (C:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftC (C:)
msivtkaaydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiyinspgg
vvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmihqplggf
qgqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqayglvdqv
le

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7dftD (D:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftD (D:)
lvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisi
yinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmi
hqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqa
yglvdqvl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7dftE (E:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftE (E:)
vpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiy
inspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmih
qplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqay
glvdqvl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >7dftF (F:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftF (F:)
msivtkaydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiyinspggv
vtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmihqplggfq
gqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqayglvdqvl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >7dftG (G:)
msivtkalnlvpmvveqtsrgeraydiysrllkerliflvgpiddhmanvivaqllflea
dnpekdisiyinspggvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkry
alpnsrvmihqplggfqgqatdidihareiltlrsrlneilakhtgqsletiardterdn
fksavdaqayglvdqvlerrpeesiqps

    Sequence, based on observed residues (ATOM records): (download) 
    >7dftG (G:)
lvpmvveraydiysrllkerliflvgpiddhmanvivaqllfleadnpekdisiyinspg
gvvtagmaiydtmqyikpdvsticvgqaasmgalllasgaagkryalpnsrvmihqplgg
fqgqatdidihareiltlrsrlneilakhtgqsletiardterdnfksavdaqayglvdq
vle