PDB entry 7de1

View 7de1 on RCSB PDB site
Description: Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal RNA binding domain
Class: viral protein
Keywords: SARS-CoV-2, nucleocapsid protein, RNA binding, C-terminal domain, VIRAL PROTEIN
Deposited on 2020-11-01, released 2021-01-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7de1a_
  • Chain 'B':
    Compound: nucleoprotein
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7de1b_
  • Heterogens: PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7de1A (A:)
saaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfap
sasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp

    Sequence, based on observed residues (ATOM records): (download) 
    >7de1A (A:)
kprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfapsasaffg
msrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >7de1B (B:)
saaeaskkprqkrtatkaynvtqafgrrgpeqtqgnfgdqelirqgtdykhwpqiaqfap
sasaffgmsrigmevtpsgtwltytgaiklddkdpnfkdqvillnkhidayktfp