PDB entry 7d9z

View 7d9z on RCSB PDB site
Description: Crystal structure of anti-basigin Fab fragment
Class: immune system
Keywords: Fab, antibody, basigin, IMMUNE SYSTEM
Deposited on 2020-10-14, released 2021-10-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-10-20, with a file datestamp of 2021-10-15.
Experiment type: XRAY
Resolution: 1.12 Å
R-factor: N/A
AEROSPACI score: 0.79 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Heavy chain of antibody Fab fragment
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D9Z (0-216)
    Domains in SCOPe 2.08: d7d9zh_
  • Chain 'L':
    Compound: Light chain of antibody Fab fragment
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D9Z (0-217)
    Domains in SCOPe 2.08: d7d9zl1, d7d9zl2
  • Heterogens: EDO, FLC, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >7d9zH (H:)
esveesggrlvtpgtpltltctvsgfslsdyamswvrqapgkglewigiiyasgstyyas
wakgrftisktsttvdlkitspttedtatyfcaryyagsdiwgpgtlvtvssastkgpsv
fplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk

    Sequence, based on observed residues (ATOM records): (download) 
    >7d9zH (H:)
esveesggrlvtpgtpltltctvsgfslsdyamswvrqapgkglewigiiyasgstyyas
wakgrftisktsttvdlkitspttedtatyfcaryyagsdiwgpgtlvtvssastkgpsv
fplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtvpss
slgtqtyicnvnhkpsntkvdkkvepks

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >7d9zL (L:)
advvmtqtpssvsaavggtvtincqasqsisaylawyqqkpgqppklliydasdlasgvs
srfkgsgsgtqftltisdlecadaatyycqtyyaiitygaafgggtevvvkrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdctysls
stltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >7d9zL (L:)
advvmtqtpssvsaavggtvtincqasqsisaylawyqqkpgqppklliydasdlasgvs
srfkgsgsgtqftltisdlecadaatyycqtyyaiitygaafgggtevvvkrtvaapsvf
ifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdctysls
stltlskadyekhkvyacevthqglsspvtksfnrge