PDB entry 7d9w

View 7d9w on RCSB PDB site
Description: gamma-glutamyltranspeptidase from pseudomonas nitroreducens complexed with l-don
Deposited on 2020-10-14, released 2021-06-23
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03
    Species: Pseudomonas nitroreducens [TaxId:46680]
    Gene: SAMN05216209_3923
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03
    Species: Pseudomonas nitroreducens [TaxId:46680]
    Gene: SAMN05216209_3923
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03
    Species: Pseudomonas nitroreducens [TaxId:46680]
    Gene: SAMN05216209_3923
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03
    Species: Pseudomonas nitroreducens [TaxId:46680]
    Gene: SAMN05216209_3923
    Database cross-references and differences (RAF-indexed):
  • Heterogens: DON, GLY, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7d9wA (A:)
mrvfhfsklplgvailaasssvfavtldggavaapdqygakvaaeilkkggnavdaavat
aftlavtypeagniggggfmtlyvdgkpyfldyreiapkaatktmylnekgevienlslv
gakaagvpgtvmglweahqrfgklkwselltpaigyaqtgfkvadqqyqyrqdaialfng
ktnfgdyfgtmkpgevfkqpelaktleriadkgpddfykgetaklliaqmkqdgglitsd
dlvdyqakwrepmridwqgntlytaplpssggialaqligikeqraadfkgvelnsakyi
hllseiekrvfadradylgdpqfskvpvaqltdpkyiakragevnpdaisatekvrpgle
phqtthfsivd

    Sequence, based on observed residues (ATOM records):
    >7d9wA (A:)
tldggavaapdqygakvaaeilkkggnavdaavataftlavtypeagniggggfmtlyvd
gkpyfldyreiapkaatktmylnekgevienlslvgakaagvpgtvmglweahqrfgklk
wselltpaigyaqtgfkvadqqyqyrqdaialfngktnfgdyfgtmkpgevfkqpelakt
leriadkgpddfykgetaklliaqmkqdgglitsddlvdyqakwrepmridwqgntlyta
plpssggialaqligikeqraadfkgvelnsakyihllseiekrvfadradylgdpqfsk
vpvaqltdpkyiakragevnpdaisatekvrpgle

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >7d9wB (B:)
tthfsivdkdgnavsntytlnwdfgsgvvvkgagfllndemddfsskpgvanafgvvgsd
anaiepgkrmlssmspsivtrdghvslvlgtpggsriftsifqvlnnvydfhlplekava
aqrvhhqllpkdtiyydayapltgkvadelkamgytledqgwnmgdiqairvngkaleta
sdprgrgvgmvvkp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7d9wC (C:)
mrvfhfsklplgvailaasssvfavtldggavaapdqygakvaaeilkkggnavdaavat
aftlavtypeagniggggfmtlyvdgkpyfldyreiapkaatktmylnekgevienlslv
gakaagvpgtvmglweahqrfgklkwselltpaigyaqtgfkvadqqyqyrqdaialfng
ktnfgdyfgtmkpgevfkqpelaktleriadkgpddfykgetaklliaqmkqdgglitsd
dlvdyqakwrepmridwqgntlytaplpssggialaqligikeqraadfkgvelnsakyi
hllseiekrvfadradylgdpqfskvpvaqltdpkyiakragevnpdaisatekvrpgle
phqtthfsivd

    Sequence, based on observed residues (ATOM records):
    >7d9wC (C:)
tldggavaapdqygakvaaeilkkggnavdaavataftlavtypeagniggggfmtlyvd
gkpyfldyreiapkaatktmylnekgevienlslvgakaagvpgtvmglweahqrfgklk
wselltpaigyaqtgfkvadqqyqyrqdaialfngktnfgdyfgtmkpgevfkqpelakt
leriadkgpddfykgetaklliaqmkqdgglitsddlvdyqakwrepmridwqgntlyta
plpssggialaqligikeqraadfkgvelnsakyihllseiekrvfadradylgdpqfsk
vpvaqltdpkyiakragevnpdaisatekvrpglephq

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >7d9wD (D:)
tthfsivdkdgnavsntytlnwdfgsgvvvkgagfllndemddfsskpgvanafgvvgsd
anaiepgkrmlssmspsivtrdghvslvlgtpggsriftsifqvlnnvydfhlplekava
aqrvhhqllpkdtiyydayapltgkvadelkamgytledqgwnmgdiqairvngkaleta
sdprgrgvgmvvkp