PDB entry 7d5p

View 7d5p on RCSB PDB site
Description: structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody
Deposited on 2020-09-27, released 2021-06-09
The last revision was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 3.65 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Drug transporter, putative
    Species: Staphylococcus aureus subsp. aureus COL [TaxId:93062]
    Gene: SACOL0086
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0H2WZS4 (0-461)
      • expression tag (462-478)
  • Chain 'B':
    Compound: Drug transporter, putative
    Species: Staphylococcus aureus subsp. aureus COL [TaxId:93062]
    Gene: SACOL0086
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0H2WZS4 (0-461)
      • expression tag (462-478)
  • Chain 'C':
    Compound: ICab
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D5P (0-130)
  • Chain 'D':
    Compound: ICab
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D5P (0-130)
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7d5pA (A:)
mnetyrggnklilgivlgvitfwlfaqslvnvvpnlqqsfgtdmgtisiavsltalfsgm
fvvgaggladkigrvkmtniglllsiigsaliiitnlpallilgrviqgvsaacimpstl
aimktyyqgaerqralsywsigswggsgicslfggavattmgwrwififsiivavlsmll
ikgtpetkseitnthkfdvaglivlvvmllslnvvitkgaalgytslwffgliaivivaf
fiflnvekkvdnplidfklfenkpytgatisnfllngvagtlivantfvqqglgytalqa
gylsitylimvllmirvgekllqkmgskrpmllgtfivvigialislvflpgifyviscv
vgylcfglglgiyatpstdtaisnapldkvgvasgiykmasslggafgvaisgavyagav
aatsihtgamialwvnvlmgimafiailfaipnddkrvkdakgtlvprgsghhhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7d5pA (A:)
klilgivlgvitfwlfaqslvnvvpnlqqsfgtdmgtisiavsltalfsgmfvvgaggla
dkigrvkmtniglllsiigsaliiitnlpallilgrviqgvsaacimpstlaimktyyqg
aerqralsywsigswggsgicslfggavattmgwrwififsiivavlsmllidvaglivl
vvmllslnvvitkgaallwffgliaivivaffiflnvklfenkpytgatisnfllngvag
tlivantfvqqglgytalqagylsitylimvllmirvgekllskrpmllgtfivvigial
islvflpgifyviscvvgylcfglglgiyatpstdtaisnapldkvgvasgiykmasslg
gafgvaisgavyagavaatsihtgamialwvnvlmgimafiailfaip

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7d5pB (B:)
mnetyrggnklilgivlgvitfwlfaqslvnvvpnlqqsfgtdmgtisiavsltalfsgm
fvvgaggladkigrvkmtniglllsiigsaliiitnlpallilgrviqgvsaacimpstl
aimktyyqgaerqralsywsigswggsgicslfggavattmgwrwififsiivavlsmll
ikgtpetkseitnthkfdvaglivlvvmllslnvvitkgaalgytslwffgliaivivaf
fiflnvekkvdnplidfklfenkpytgatisnfllngvagtlivantfvqqglgytalqa
gylsitylimvllmirvgekllqkmgskrpmllgtfivvigialislvflpgifyviscv
vgylcfglglgiyatpstdtaisnapldkvgvasgiykmasslggafgvaisgavyagav
aatsihtgamialwvnvlmgimafiailfaipnddkrvkdakgtlvprgsghhhhhhhh

    Sequence, based on observed residues (ATOM records):
    >7d5pB (B:)
lilgivlgvitfwlfaqslvnvvpnlqqsfgtdmgtisiavsltalfsgmfvvgagglad
kigrvkmtniglllsiigsaliiitnlpallilgrviqgvsaacimpstlaimktyyqga
erqralsywsigswggsgicslfggavattmgwrwififsiivavlsmllikgtpetkva
glivlvvmllslnvvitkgaallwffgliaivivaffiflnvklfenkpytgatisnfll
ngvagtlivantfvqqglgytalqagylsitylimvllmirvgekllskrpmllgtfivv
igialislvflpgifyviscvvgylcfglglgiyatpstdtaisnapldkvgvasgiykm
asslggafgvaisgavyagavaatsihtgamialwvnvlmgimafiailfaip

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >7d5pC (C:)
qvqleesgggsvqaggslrlscaasgymystystycmgwfrqapgkeregvafikrgdhs
tyytdsvkgrftisqdsakntvslqmnnlkpedtaiyycaadfahsfllsvhsgagqysy
wgqgtqvtvss

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >7d5pD (D:)
qvqleesgggsvqaggslrlscaasgymystystycmgwfrqapgkeregvafikrgdhs
tyytdsvkgrftisqdsakntvslqmnnlkpedtaiyycaadfahsfllsvhsgagqysy
wgqgtqvtvss