PDB entry 7d3r

View 7d3r on RCSB PDB site
Description: foot and mouth disease virus a/wh/cha/09-bound the single chain fragme antibody r50
Deposited on 2020-09-20, released 2021-04-14
The last revision was dated 2021-05-12, with a file datestamp of 2021-05-07.
Experiment type: EM
Resolution: 3.49 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: a/wh/cha/09 vp1
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R (0-End)
  • Chain '2':
    Compound: a/wh/cha/09 vp2
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R (Start-217)
  • Chain '3':
    Compound: a/wh/cha/09 vp3
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R (0-End)
  • Chain '4':
    Compound: a/wh/cha/09 vp4
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R
  • Chain 'H':
    Compound: r50 vh
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R (0-End)
  • Chain 'L':
    Compound: r50 vl
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3R

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence, based on SEQRES records:
    >7d3r1 (1:)
ttatgesadpvtttvenyggetqvqrrhhtdvsfimdrfvqikpvspthvidlmqthqhg
lvgamlraatyyfsdleivvnhtgrltwvpngapeaaldntsnptayhkapftrlalpyt
aphrvlatvyngnskysapatrrgdlgslaarlaaqlpasfnygairateiqellvrmkr
aelycprpllavkvtsqdrhkqkiiapakqll

    Sequence, based on observed residues (ATOM records):
    >7d3r1 (1:)
ttatgesadpvtttvenyggetqvqrrhhtdvsfimdrfvqikpvspthvidlmqthqhg
lvgamlraatyyfsdleivvnhtgrltwvpngapeaaldntsnptayhkapftrlalpyt
aphrvlatvyngnskylaaqlpasfnygairateiqellvrmkraelycprpllavkvts
qdrhkq

  • Chain '2':
    Sequence, based on SEQRES records:
    >7d3r2 (2:)
dkkteettlledrilttrnghttsttqssvgvtygystgedhvsgpntsgletrvvqaer
ffkkhlfdwttdkpfghieklelptdhkgvygqlvdsfaymrngwdvevsavgnqfnggc
llvamvpefkefttrekyqltlfphqfisprtnmtahitvpylgvnrydqynkhkpwtlv
vmvvsplttssigasqikvytniapthvhvagelpske

    Sequence, based on observed residues (ATOM records):
    >7d3r2 (2:)
rilttrnghttsttqssvgvtygystgedhvsgpntsgletrvvqaerffkkhlfdwttd
kpfghieklelptdhkgvygqlvdsfaymrngwdvevsavgnqfnggcllvamvpefkef
ttrekyqltlfphqfisprtnmtahitvpylgvnrydqynkhkpwtlvvmvvsplttssi
gasqikvytniapthvhvagelpske

  • Chain '3':
    Sequence, based on SEQRES records:
    >7d3r3 (3:)
givpvacsdgygglvttdpktadpaygmvynpprtnypgrftnlldvaeacptflcfddg
kpyvvtradeqrllakfdlslaakhmsntylsgiaqyyaqysgtinlhfmftgstdskar
ymvayvppgvttppdtperaahcihaewdtglnskftfsipyvsaadyaytasdvadttn
vqgwvciyqithgkaeqdtlvvsvsagkdfelrlpidpraq

    Sequence, based on observed residues (ATOM records):
    >7d3r3 (3:)
givpvacsdgygglvttdpktadpaygmvynpprtnypgrftnlldvaeacptflcfddg
kpyvvtradeqrllakfdlslaakhmsntylsgiaqyyaqysgtinlhfmftgstdskar
ymvayvppgvttppdtperaahcihaewdtglnskftfsipyvsaadyaytasdvadttn
vqgwvciyqithgkaeqdtlvvsvsagkdfelrlpidpra

  • Chain '4':
    Sequence, based on SEQRES records:
    >7d3r4 (4:)
gagqsspatgsqnqsgntgsiinnyymqqyqnsmdtqlgdnaisggsnegstdttsshtt
ntqnndwfsklassaftglfgalla

    Sequence, based on observed residues (ATOM records):
    >7d3r4 (4:)
sgntgsiinnyymqqyqnsmdtqlgndwfsklassaftglfgall

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7d3rH (H:)
qvqlresgpslvkpsqtlsltctasglslsdkavgwvrraptkalewlgsidtgsstgyn
pglksrlsitkdnsrnqvsltitsvttedsatyycatvhqhtsekrtcprayrpdcaarw
dcpggadcgycnfgagsygrctpftltytfenyvhtwgqgllvtvss

    Sequence, based on observed residues (ATOM records):
    >7d3rH (H:)
qvqlresgpslvkpsqtlsltctasglslsdkavgwvrraptkalewlgsidtgsstgyn
pglksrlsitkdnsrnqvsltitsvttedsatyycatvhqhtsekrtcprayrpdcaarw
dcpggadcgycnfgagsygrctpf

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7d3rL (L:)
waqavltqpssvsgslgqrvsitcsgsssnvgngyvswyqlipgsaprtliygdtnrasg
vpdrfsgsragntatlsisslqaedeaeyfcaspedsssnanfgsgttltvlgdykdddd
kgg

    Sequence, based on observed residues (ATOM records):
    >7d3rL (L:)
vltqpssvsgslgqrvsitcsgsssnvgngyvswyqlipgsaprtliygdtnrasgvpdr
fsgsragntatlsisslqaedeaeyfcaspedsssnanfgsgttltvl