PDB entry 7d3k

View 7d3k on RCSB PDB site
Description: foot and mouth disease virus o/tibet/99-bound the single chain fragmen antibody b77
Deposited on 2020-09-19, released 2021-04-14
The last revision was dated 2021-05-12, with a file datestamp of 2021-05-07.
Experiment type: EM
Resolution: 3.9 Å
R-factor: N/A
AEROSPACI score: 0.06 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: o/tibet/99 vp1
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K
  • Chain '2':
    Compound: o/tibet/99 vp2
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K (Start-217)
  • Chain '3':
    Compound: o/tibet/99 vp3
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K (0-End)
  • Chain '4':
    Compound: o/tibet/99 vp4
    Species: Foot-and-mouth disease virus [TaxId:12110]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K (Start-84)
  • Chain 'H':
    Compound: b77 vh
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K
  • Chain 'L':
    Compound: b77 vl
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • PDB 7D3K

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence, based on SEQRES records:
    >7d3k1 (1:)
ttstgesadpvtatvenyggetqvqrrqhtdvsfildrfvkvtpkdqinvldlmqtpaht
lvgallrtatyyfadlevavkhegnltwvpngapetaldnttnptayhkapltrlalpyt
aphrvlatvyngnckygespvtnargdlqvlaqkaaralptsfnygaikatrvtellyrm
kraetycprpllaihpsearhkqkivapvkqll

    Sequence, based on observed residues (ATOM records):
    >7d3k1 (1:)
tstgesadpvtatvenyggetqvqrrqhtdvsfildrfvkvtpkdqinvldlmqtpahtl
vgallrtatyyfadlevavkhegnltwvpngapetaldnttnptayhkapltrlalpyta
phrvlatvyngralptsfnygaikatrvtellyrmkraetycprpllaihpsearhkqki
vap

  • Chain '2':
    Sequence, based on SEQRES records:
    >7d3k2 (2:)
dkkteettlledrilttrnghttsttqssvgvtygyataedfvsgpntsgletrvvqaer
ffkthlfdwvtsdpfgrcyqlelptdhkgvygsltdsyaymrngwdvevtavgnqfnggc
llvamvpelcsidkrglyqltlfphqfinprtnmtahitvpfvgvnrydqykvhkpwtlv
vmvvapltvntegapqikvyaniaptnvhvagefpske

    Sequence, based on observed residues (ATOM records):
    >7d3k2 (2:)
rilttrnghttsttqssvgvtygyataedfvsgpntsgletrvvqaerffkthlfdwvts
dpfgrcyqlelptdhkgvygsltdsyaymrngwdvevtavgnqfnggcllvamvpelcsi
dkrglyqltlfphqfinprtnmtahitvpfvgvnrydqykvhkpwtlvvmvvapltvnte
gapqikvyaniaptnvhvagefpske

  • Chain '3':
    Sequence, based on SEQRES records:
    >7d3k3 (3:)
gifpvacsdgygglvttdpktadpaygkvfnpprnmlpgrftnfldvaeacptflhfegd
vpyvttktdsdrvlaqfdlslaakhmsntflaglaqyytqysgtinlhfmftgptdakar
ymiayappgmeppktpeaaahcihaewdtglnskftfsipylsaadyaytasdaaettnv
qgwvclfqithgkadgdalvvlasagkdfelrlpvdartq

    Sequence, based on observed residues (ATOM records):
    >7d3k3 (3:)
gifpvacsdgygglvttdpktadpaygkvfnpprnmlpgrftnfldvaeacptflhfegd
vpyvttktdsdrvlaqfdlslaakhmsntflaglaqyytqysgtinlhfmftgptdakar
ymiayappgmeppktpeaaahcihaewdtglnskftfsipylsaadyaytasdaaettnv
qgwvclfqithgkadgdalvvlasagkdfelrlpvdart

  • Chain '4':
    Sequence, based on SEQRES records:
    >7d3k4 (4:)
gagqsspatgsqnqsgntgsiinnyymqqyqnsmdtqlgdnaisggsnegstdttsthtt
ntqnndwfsklassafsglfgalla

    Sequence, based on observed residues (ATOM records):
    >7d3k4 (4:)
sgntgsiinnyymqqyqnsmdtqlgwfsklassafsglfgalla

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7d3kH (H:)
qvqlresgpslvkpsqtlsltctisgfslssytigwvrqapgkalewigdmsnggmpyyn
palksrlsitkhnsksqvrlsvssvtpedtatyycaksrytgdgsiglygvdawgqglli
tvss

    Sequence, based on observed residues (ATOM records):
    >7d3kH (H:)
sgpslvkpsqtlsltctisgfslssytigwvrqapgkalewigdmsnggmpyynpalksr
lsitkhnsksqvrlsvssvtpedtatyycaksrytgdgsiglygvdawg

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7d3kL (L:)
waqavltqpssvsgslgqrvsitcsgtysnvgtgnyvswfqqipgsaprtliysvtnras
gvpdrfsgsrsghtatltisslqaedeadyfclswqsgntalfgsgttltvlgdykdddd
kgg

    Sequence, based on observed residues (ATOM records):
    >7d3kL (L:)
itcsgtysnvgtgnyvswfqqipsaprtliysvtnrasgvpdrfsgsrsghtatltissl
qaedeadyfclswqsgntalfgsgt