PDB entry 7d1m

View 7d1m on RCSB PDB site
Description: CRYSTAL STRUCTURE OF THE SARS-CoV-2 MAIN PROTEASE COMPLEXED WITH GC376
Class: viral protein
Keywords: SARS-CoV-2, main protease, inhibitor, GC376, VIRAL PROTEIN
Deposited on 2020-09-14, released 2020-10-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.64 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3C-like proteinase
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7d1ma_
  • Chain 'B':
    Compound: 3C-like proteinase
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7d1mb_
  • Heterogens: DMS, K36, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7d1mA (A:)
gsgfrkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedlli
rksnhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyn
gspsgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdleg
nfygpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkyny
epltqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrq
csgvtfq

    Sequence, based on observed residues (ATOM records): (download) 
    >7d1mA (A:)
gfrkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedllirk
snhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegnf
ygpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkynyep
ltqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrqcs
gvtfq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7d1mB (B:)
gsgfrkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedlli
rksnhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyn
gspsgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdleg
nfygpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkyny
epltqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrq
csgvtfq

    Sequence, based on observed residues (ATOM records): (download) 
    >7d1mB (B:)
frkmafpsgkvegcmvqvtcgtttlnglwlddvvycprhvictsedmlnpnyedllirks
nhnflvqagnvqlrvighsmqncvlklkvdtanpktpkykfvriqpgqtfsvlacyngsp
sgvyqcamrpnftikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegnfy
gpfvdrqtaqaagtdttitvnvlawlyaavingdrwflnrftttlndfnlvamkynyepl
tqdhvdilgplsaqtgiavldmcaslkellqngmngrtilgsalledeftpfdvvrqcsg
vtfq