PDB entry 7d0j

View 7d0j on RCSB PDB site
Description: photosystem i-lhci-lhcii of chlamydomonas reinhardtii
Deposited on 2020-09-10, released 2021-03-03
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: EM
Resolution: 3.42 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '2':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '3':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '4':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '5':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '6':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '7':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '8':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain '9':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'A':
    Compound: photosystem I p700 chlorophyll a apoprotein a1
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: photosystem I p700 chlorophyll a apoprotein a2
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: photosystem I iron-sulfur center
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: photosystem I reaction center subunit II, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Photosystem I reaction center subunit IV, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Photosystem I reaction center subunit F, Photosystem I reaction center subunit III, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: photosystem I reaction center subunit v, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: photosystem I reaction center subunit vi, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Photosystem I reaction center subunit VIII
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Photosystem I reaction center subunit IX
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: photosystem I reaction center subunit psak, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: PSI subunit V
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: Photosystem I subunit O
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'U':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Chain 'a':
    Compound: Chlorophyll a-b binding protein, chloroplastic
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CLA, PQN, LHG, BCR, SF4, DGD, SQD, LMG, CHL, LUT, XAT, NEX

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j1 (1:)
    kagnwlpgsdapawlpddlpgnygfdplslgkepaslkrftesevihgrwamlgvagsla
    vellgygnwydaplwavnggkatwfgievpfdlnallafefvamaaaegqrgdaggvvyp
    ggafdplgfakdssksgelklkeikngrlamvaflgfvaqhaatgkgpiaalgehlanpw
    ganfatngisvpff
    

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j2 (2:)
    rpmwypgatapahldgsmlgdygfdplrlgvnkdnlkwfreaeltngrwamaavvgilft
    davglpkfwtagaekyaldnqtlalievavfavlegkryeiykktgetgflsfapfdpmg
    mkseemklkelkngrlamlaflgfcsqaavygkgpietlqlhladpghnniytssvgpet
    avtvavlcvlpmiieatktln
    

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j3 (3:)
    lpgdfgfdplglldpvnsggfiepkwlqyseviharwamlgaagciapevlgaaglipda
    tnikwfesgvippagsyngywadpytiffveivamqfaelrrlqdfrypgsmgqqyflgl
    eaifkgsgdaaypggpffnlfnlgkteaamkelklkeikngrlamlamlgygaqavmtgk
    gpfqnlvehladpvnnniltnfa
    

  • Chain '4':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j4 (4:)
    lpswmpgadlpgylngtlpgdfgfdplylgqdpvklkwyaqaelmnarfamlavagilvp
    ellsnigfswpgagvawydagkfeyfapasslfgvqmllfawveirryqdfvkpgsanqd
    piftnnklpdgnepgypggifdpfgwskgdikslklkeikngrlamlafagfigqayttg
    ttplknlsthladpwsttvwqndla
    

  • Chain '5':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j5 (5:)
    rklwapgvvapeylkgdlagdygwdplglgadptalkwyrqselqharwamlgvagvlvq
    eivkpdvyfyeaglpqnlpepftninmggllawefilmhwvevrrwqdyknfgsvnedpi
    fkgnkvpnpemgypggifdpfgfskgnlkelqtkeikngrlamiaymafilqaqatgkgp
    laalsahlsnpfgnnilknigtctvphsvdvqgltipltclwpgs
    

  • Chain '6':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j6 (6:)
    srplwlpgstppahlkgdlpgdfgfdplglganaeslkwfkeselvhsrwamaavagilv
    qeivrpdvfwynagkevesplgplgllavefflmhwvevrrwqdlrkpgsvdqdpifsqy
    klpphevgypggvfapfipgdlaelkvkeikngrlamlafvgfvmaaqvtgkgpiaalqe
    hladpwgttifskaavvpgqavappckipasvsykgieiptpcflqglwp
    

  • Chain '7':
    Sequence, based on SEQRES records:
    >7d0j7 (7:)
    vrpvwfpgnpppahldgslagdygfdplflgqepqtlkwyvqaelvhgrfamlgaagiil
    tsigakvglgfpewydagkvvveknnidfptlmviqfylmgwaetkrwydfknpgsqadg
    sflgfteefkglengypggrffdpmglsrgdaakyqeykqkevkngrlamiaclgfaaqy
    aatgkgpldnladhladpnhvnfatngvsnpia
    

    Sequence, based on observed residues (ATOM records):
    >7d0j7 (7:)
    vrpvwfpgnpppahldgslagdygfdplflgqepqtlkwyvqaelvhgrfamlgaagiil
    tsigakvglgfpewydagkvvveknnidfptlmviqfylmgwaetkrwydfknpgsqadg
    sflgfteefkglengypggrffdpmglsrgdaakyqeykqkevkngrlamiaclgfaaqy
    aatgkgpldnladhladpnhvnfatngvsnpi
    

  • Chain '8':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j8 (8:)
    rqswlpgsqipahldtpaaqalagnfgfdplglgkdpvalrwyqqaelihcrtamagvag
    ilipglltkagalnvpewydagkvaiensfapwgsllavqlflcgfveakrwqdirkpgs
    qgepgsflgfeaslkgtselgypggpfdplglskeadkwadwklkevkngrlamlaflgf
    vaqkyatgagpvdnlaahlkdpwhvnyatngvslpfl
    

  • Chain '9':
    Sequence; same for both SEQRES and ATOM records:
    >7d0j9 (9:)
    ptwlpglnppahlkgalagdngfdplglgqdegrlkwyaeaektngrwammavagilgqe
    llgvtpawweagakeydipaqaltpiefivmgfleikryqgfkqtgtsgfinsfpfdpag
    mnspsmatkevkngrlamvafigfcvqalatrtqpiegltahladpfgknityylthlpe
    tl
    

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jA (A:)
    kvkiavdrnpvetsfekwakpghfsrtlskgpntttwiwnlhadahdfdshtsdleeisr
    kvfsahfgqlgiifiwlsgmyfhgarfsnyeawlsdpthikpsaqvvwpivgqeilngdv
    gggfqgiqitsgffqlwrasgitselqlyttaigglvmaaamffagwfhyhkaapklewf
    qnvesmlnhhlggllglgslawaghqihvslpvnklldagvdpkeiplphdlllnraima
    dlypsfakgiapfftlnwseysdfltfkgglnpvtgglwlsdtahhhvaiavlflvaghm
    yrtnwgighsmkeileahrgpftgeghvglyeilttswhaqlainlalfgslsiivahhm
    yamppypylatdygtqlslfthhtwiggfcivgagahaaifmvrdydptnnynnlldrvi
    rhrdaiishlnwvciflgfhsfglyihndtmsalgrpqdmfsdtaiqlqpvfaqwiqnth
    flapqltapnalaatsltwggdlvavggkvammpislgtsdfmvhhihaftihvtvlill
    kgvlfarssrlipdkanlgfrfpcdgpgrggtcqvsawdhvflglfwmynslsivifhfs
    wkmqsdvwgtvtasgvshitggnfaqsantingwlrdflwaqssqviqsygsalsaygli
    flgahfvwafslmflfsgrgywqeliesivwahnklkvapaiqpralsitqgravgvahy
    llggiattwsfflariisvg
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jB (B:)
    atklfpkfsqglaqdpttrriwyglamahdfeshdgmteenlyqkifashfgqlsiiflw
    tsgnlfhvawqgnfeqwvtdpvhirpiahaiwdphfgqpaveaftrggasgpvnistsgv
    yqwwytigmrtnqdlyvgsvflalvsaiflfagwlhlqpnfqpslswfkdaesrlnhhls
    glfgvsslawtghlvhvaipesrgqhvgwdnflsvlphpqgltpfftgnwaayaqspdta
    shvfgtaqgsgqailtflggfhpqtqslwltdmahhhlaiavifivaghmyrtnfgighr
    mqaileahtppsgslgaghkglfdtvnnslhfqlglalasvgtitslvaqhmyslppyaf
    qaidfttqaalythhqyiagfimcgafahgaiffirdydpeqnkgnvlarmldhkealis
    hlswvslflgfhtlglyvhndvmqafgtpekqiliepvfaqwiqaahgkalygfdfllss
    ktsaafangqslwlpgwldainnnqnslfltigpgdflvhhaialglhtttlilvkgald
    argsklmpdkkdfgysfpcdgpgrggtcdisaydafylavfwmlntigwvtfywhwkhlt
    lwqgnvaqfdesstylmgwlrdylwlnssqlingynpfgmnslsvwawtflfghliyatg
    fmfliswrgywqelietlvwahektplanlvywkdkpvalsivqarlvglahfsvgyift
    yaafliastsgrfg
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jC (C:)
    ahivkiydtcigctqcvracpldvlemvpwdgckasqmasaprtedcvgckrcetacptd
    flsvrvylgsestrsmglsy
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jD (D:)
    wtvptlnpdtpspifggstggllrkaqteefyvitweakkeqifemptggaaimrqgpnl
    lkfgkkeqclalttqlrnkfkltpcfyrvfpdgkvqylhpadgvypekvnagrvganqnm
    rrigqnvnpikvkfsgrmmspaei
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jE (E:)
    evgpkrgslvkilrpesywfnqvgkvvsvdqsgvrypvvvrfenqnyagvttnnyaldev
    vaa
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jF (F:)
    diagltpcseskayaklekkelktlekrlkqyeadsapavalkatmertkarfanyakag
    llcgndglphliadpglalkyghagevfiptfgflyvagyigyvgrqyliavkgeakptd
    keiiidvplatklawqgagwplaavqelqrgtllekeenitvspr
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jG (G:)
    ldpqivisgstaaflaigrfvflgyqrreanfdstvgpkttgatyfddlqknstifatnd
    pagfniidvagwgalghavgfavlainslqg
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jH (H:)
    kygensryfdlqdmenttgswdmygvdekkrypdnqakfftqatdiisrreslralvals
    giaaivtyglkgakdadlpitkgpqttgengkggsvrsrl
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jI (I:)
    pfvppswapsvfvpltglvlpaiamatlfvyiekeap
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jJ (J:)
    mkdfttylstapviatiwftftagllieinryfpdplvfsf
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jK (K:)
    figsstnlimvasttatlaaarfglaptvkknttaglklvdsknsagvisndpagftivd
    vlamgaaghglgvgivlglkgigal
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jL (L:)
    kkaqvispvngdpfvgmletpvtsapivatylsnlpayrtgvapvlrgveiglahgflla
    gpfiklgplrnvpetaeiagslsaaglvlilalclsiygsaqfqstpsigvktlsgrsva
    rdplfsadgwsefaagflvggeagvawayvctqilpyys
    

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jO (O:)
    asnksfprdwvktdplvpvlgfagwtipanigvsafggqslfglftqsigenlahfptgp
    alddkfwlylityhlglfltitlgqigvqgrkq
    

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jP (P:)
    iefygpnrakwlgpysenatpayltgefpgdygwdtaglsadpetfkryreleliharwa
    mlgalgcitpellaksgtqfgeavwfkagaqifseggldylgnpslvhaqnivatlavqv
    ilmglvegyrvnggpagegldplypgesfdplgladdpdtfaelkvkeikngrlamfsmf
    gffvqaivtgkgpiqnlddhlsnptvnnafafatkftps
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jQ (Q:)
    iefygpnrakwlgpysenatpayltgefpgdygwdtaglsadpetfkryreleliharwa
    mlgalgcitpellaksgtqfgeavwfkagaqifseggldylgnpslvhaqnivatlavqv
    ilmglvegyrvnggpagegldplypgesfdplgladdpdtfaelkvkeikngrlamfsmf
    gffvqaivtgkgpiqnlddhlsnptvnnafafatkftps
    

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jR (R:)
    iefygpnrakwlgpysenatpayltgefpgdygwdtaglsadpetfkryreleliharwa
    mlgalgcitpellaksgtqfgeavwfkagaqifseggldylgnpslvhaqnivatlavqv
    ilmglvegyrvnggpagegldplypgesfdplgladdpdtfaelkvkeikngrlamfsmf
    gffvqaivtgkgpiqnlddhlsnptvnnafafatkftps
    

  • Chain 'S':
    Sequence, based on SEQRES records:
    >7d0jS (S:)
    kktaakaaapkssgvefygpnrakwlgpysenstpayltgefpgdygwdtaglsadpetf
    kryreleliharwamlgalgcltpellakngtkfgeavwfkagaqifseggldylgnpsl
    vhaqnivatlavqvilmgliegyrvnggpagegldplypgesfdplgladdpdtfaelkv
    keikngrlamfsmfgffvqaivtgkgpvqnlddhlanptvnnafafatkftpsa
    

    Sequence, based on observed residues (ATOM records):
    >7d0jS (S:)
    kktaakaaapkssgvefygpnrakwlgpysenstpayltgefpgdygwdtaglsadpetf
    kryreleliharwamlgalgcltpellakngtkfgeavwfkagaqifseggldylgnpsl
    vhaqnivatlavqvilmgliegyrvnggpagegldplypgesfdplgladdpdtfaelkv
    keikngrlamfsmfgffvqaivtgkgpvqnlddhlanptvnnafafatkftps
    

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jT (T:)
    iefygpnrakwlgpysenatpayltgefpgdygwdtaglsadpetfkryreleliharwa
    mlgalgcitpellaksgtqfgeavwfkagaqifseggldylgnpslvhaqnivatlavqv
    ilmglvegyrvnggpagegldplypgesfdplgladdpdtfaelkvkeikngrlamfsmf
    gffvqaivtgkgpiqnlddhlsnptvnnafafatkftps
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records:
    >7d0jU (U:)
    iefygpnrakwlgpysenatpayltgefpgdygwdtaglsadpetfkryreleliharwa
    mlgalgcitpellaksgtqfgeavwfkagaqifseggldylgnpslvhaqnivatlavqv
    ilmglvegyrvnggpagegldplypgesfdplgladdpdtfaelkvkeikngrlamfsmf
    gffvqaivtgkgpiqnlddhlsnptvnnafafatkftps
    

  • Chain 'a':
    Sequence; same for both SEQRES and ATOM records:
    >7d0ja (a:)
    kagnwlpgsdapawlpddlpgnygfdplslgkepaslkrftesevihgrwamlgvagsla
    vellgygnwydaplwavnggkatwfgievpfdlnallafefvamaaaegqrgdaggvvyp
    ggafdplgfakdssksgelklkeikngrlamvaflgfvaqhaatgkgpiaalgehlanpw
    ganfatngisvpff