PDB entry 7cor

View 7cor on RCSB PDB site
Description: Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Class: motor protein
Keywords: Computational Design, Rotary Molecular Motor, Complex, MOTOR PROTEIN
Deposited on 2020-08-05, released 2021-08-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-08-11, with a file datestamp of 2021-08-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: V-type sodium ATPase catalytic subunit A
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpA, EHR_08260
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08636 (3-595)
      • expression tag (0-2)
  • Chain 'B':
    Compound: V-type sodium ATPase catalytic subunit A
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpA, EHR_08260
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08636 (3-595)
      • expression tag (0-2)
  • Chain 'C':
    Compound: V-type sodium ATPase catalytic subunit A
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpA, EHR_08260
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08636 (3-595)
      • expression tag (0-2)
  • Chain 'D':
    Compound: V-type sodium ATPase subunit B
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpB, EHR_08265
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08637 (0-457)
      • engineered mutation (150-152)
      • engineered mutation (154-158)
      • engineered mutation (247)
      • engineered mutation (338)
    Domains in SCOPe 2.08: d7cord1, d7cord2, d7cord3
  • Chain 'E':
    Compound: V-type sodium ATPase subunit B
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpB, EHR_08265
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08637 (0-457)
      • engineered mutation (150-152)
      • engineered mutation (154-158)
      • engineered mutation (247)
      • engineered mutation (338)
    Domains in SCOPe 2.08: d7core1, d7core2, d7core3
  • Chain 'F':
    Compound: V-type sodium ATPase subunit B
    Species: Enterococcus hirae ATCC 9790 [TaxId:768486]
    Gene: ntpB, EHR_08265
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q08637 (0-457)
      • engineered mutation (150-152)
      • engineered mutation (154-158)
      • engineered mutation (247)
      • engineered mutation (338)
  • Heterogens: ADP, MG, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >7corD (D:)
mikeyrtikevvgplmavekvsgvkyeelievrmqngeirrgqvlevqedkamvqifegt
sginlknssvrflghplqlgvsedmigrvfdglgrpkdngpeilpekyldingevinpia
rdypdefiqtgisaidhlntlvrgqklpvfgppgagksalaaqiarqatvldssddfavv
faaigitfeeaeffmedfrqtgaidrsvmfmnlandpaieriatprmaltaaeylayekg
mhvlvimedmtnyaealreisaarrevpgrrgypgylytnlatlferagrirglkgsvtq
ipiltmpeddkthpipdltgyitegqiiltrelyksgisppidvlpslsrlkdkgtgagk
tredhaatmnqlfaayaqgkqakelavvlgesalsdidkiyakfaerfeneyvnqgfytn
rtitetldlgwellamlprtelkrikddlldkylpegk

    Sequence, based on observed residues (ATOM records): (download) 
    >7corD (D:)
keyrtikevvgplmavekvsgvkyeelievrmqngeirrgqvlevqedkamvqifegtsg
inlknssvrflghplqlgvsedmigrvfdglgrpkdngpeilpekyldingevinpiard
ypdefiqtgisaidhlntlvrgqklpvfgppgagksalaaqiarqatvldssddfavvfa
aigitfeeaeffmedfrqtgaidrsvmfmnlandpaieriatprmaltaaeylayekgmh
vlvimedmtnyaealreisaarrevpgrrgypgylytnlatlferagrirglkgsvtqip
iltmpeddkthpipdltgyitegqiiltrelyksgisppidvlpslsrlkdkgtgagktr
edhaatmnqlfaayaqgkqakelagesalsdidkiyakfaerfeneyvnqgfytnrtite
tldlgwellamlprtelkrikddl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7corE (E:)
mikeyrtikevvgplmavekvsgvkyeelievrmqngeirrgqvlevqedkamvqifegt
sginlknssvrflghplqlgvsedmigrvfdglgrpkdngpeilpekyldingevinpia
rdypdefiqtgisaidhlntlvrgqklpvfgppgagksalaaqiarqatvldssddfavv
faaigitfeeaeffmedfrqtgaidrsvmfmnlandpaieriatprmaltaaeylayekg
mhvlvimedmtnyaealreisaarrevpgrrgypgylytnlatlferagrirglkgsvtq
ipiltmpeddkthpipdltgyitegqiiltrelyksgisppidvlpslsrlkdkgtgagk
tredhaatmnqlfaayaqgkqakelavvlgesalsdidkiyakfaerfeneyvnqgfytn
rtitetldlgwellamlprtelkrikddlldkylpegk

    Sequence, based on observed residues (ATOM records): (download) 
    >7corE (E:)
ikeyrtikevvgplmavekvsgvkyeelievrmqngeirrgqvlevqedkamvqifegts
ginlknssvrflghplqlgvsedmigrvfdglgrpkdngpeilpekyldingevinpiar
dypdefiqtgisaidhlntlvrgqklpvfgppgagksalaaqiarqatvldssddfavvf
aaigitfeeaeffmedfrqtgaidrsvmfmnlandpaieriatprmaltaaeylayekgm
hvlvimedmtnyaealreisaarrevpgrrgypgylytnlatlferagrirglkgsvtqi
piltmpeddkthpipdltgyitegqiiltrelyksgisppidvlpslsrlkdkgtgagkt
redhaatmnqlfaayaqgkqakelsdidkiyakfaerfeneyvnqgfytnrtitetldlg
wellamlprtelkrikddll

  • Chain 'F':
    No sequence available.