PDB entry 7co5

View 7co5 on RCSB PDB site
Description: htra-type protease algw with decapeptide
Deposited on 2020-08-03, released 2021-03-10
The last revision was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'B':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'D':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'F':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'H':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'J':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: decapeptide SVRDELRWVF
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CO5 (Start-9)
  • Chain 'L':
    Compound: AlgW protein
    Species: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) [TaxId:208964]
    Gene: algW, PA4446
    Database cross-references and differences (RAF-indexed):
  • Heterogens: IMD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7co5A (A:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5A (A:)
delrwvf

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7co5B (B:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5B (B:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7co5C (C:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5C (C:)
delrwvf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7co5D (D:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5D (D:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7co5E (E:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5E (E:)
elrwvf

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7co5F (F:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5F (F:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7co5G (G:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5G (G:)
elrwvf

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7co5H (H:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5H (H:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp

  • Chain 'I':
    Sequence, based on SEQRES records:
    >7co5I (I:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5I (I:)
elrwvf

  • Chain 'J':
    Sequence, based on SEQRES records:
    >7co5J (J:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5J (J:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp

  • Chain 'K':
    Sequence, based on SEQRES records:
    >7co5K (K:)
svrdelrwvf

    Sequence, based on observed residues (ATOM records):
    >7co5K (K:)
vrdelrwvf

  • Chain 'L':
    Sequence, based on SEQRES records:
    >7co5L (L:)
mpkalrflgwpvlvgvllalliiqhnpelvglprqevhveqapllsrlqegpvsyanavs
raapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavimsaegyllt
nnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrsdgirtgdv
claignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalvdaagnlig
intaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpelaeslglg
etagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgqkisivvlr
ngqkvnltaevglrppp

    Sequence, based on observed residues (ATOM records):
    >7co5L (L:)
vsyanavsraapavanlyttkmvskpshplfddpmfrrffgdnlpqqkrmesslgsavim
saegylltnnhvtagadqiivalrdgretiaqlvgsdpetdlavlkidlknlpamtlgrs
dgirtgdvclaignpfgvgqtvtmgiisatgrnqlglntyedfiqtdaainpgnsggalv
daagnligintaifsksggsqgigfaiptklalevmqsiiehgqvirgwlgvevkaltpe
laeslglgetagivvagvyrdgpaarggllpgdviltidkqeasdgrrsmnqvartrpgq
kisivvlrngqkvnltaevglrppp