PDB entry 7chb

View 7chb on RCSB PDB site
Description: Crystal structure of the SARS-CoV-2 RBD in complex with BD-236 Fab
Class: antiviral protein/immune system
Keywords: SARS-Cov-2, RBD, mAb, ANTIVIRAL PROTEIN, ANTIVIRAL PROTEIN-IMMUNE SYSTEM complex
Deposited on 2020-07-05, released 2020-09-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-03-10, with a file datestamp of 2021-03-05.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: BD-236 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CHB (0-End)
    Domains in SCOPe 2.08: d7chbh_
  • Chain 'L':
    Compound: BD-236 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7CHB
    Domains in SCOPe 2.08: d7chbl1, d7chbl2
  • Chain 'R':
    Compound: Spike protein S1
    Species: Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049]
    Gene: S, 2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7chbr_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >7chbH (H:)
evqlvesgggliqpggslrlscaasgitvssnymswvrqapgkglewvsviysggstdya
dsvkgrftisrdkskntlylqmnslraedtavyycardlgeaggmdvwgqgttvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk

    Sequence, based on observed residues (ATOM records): (download) 
    >7chbH (H:)
evqlvesgggliqpggslrlscaasgitvssnymswvrqapgkglewvsviysggstdya
dsvkgrftisrdkskntlylqmnslraedtavyycardlgeaggmdvwgqgttvtvssas
tkgpsvfplapsskgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >7chbL (L:)
aiqltqspsslsasvgdrvtitcrasqgissylawyqqkpgkapklliyaastlqsgvps
rfsgsgsgtdftltisslqpedfatyycqqlnsyppafgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >7chbL (L:)
iqltqspsslsasvgdrvtitcrasqgissylawyqqkpgkapklliyaastlqsgvpsr
fsgsgsgtdftltisslqpedfatyycqqlnsyppafgggtkveikrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrg

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >7chbR (R:)
rvqptesivrfpnitnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfk
cygvsptklndlcftnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawns
nnldskvggnynylyrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfq
ptngvgyqpyrvvvlsfellhapatvcgpkkstnlvknkcvnf

    Sequence, based on observed residues (ATOM records): (download) 
    >7chbR (R:)
tnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcf
tnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyl
yrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvv
lsfeatvcg