PDB entry 7cf6

View 7cf6 on RCSB PDB site
Description: crystal structure of beta-aspartyl dipeptidase from thermophilic keratin degrading fervidobacterium islandicum aw-1 in complex with beta-asp-leu dipeptide
Deposited on 2020-06-24, released 2020-12-30
The last revision was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Isoaspartyl dipeptidase
    Species: Fervidobacterium islandicum [TaxId:2423]
    Gene: NA23_08080
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A1B0VPV0 (4-End)
      • initiating methionine (0)
      • expression tag (1-3)
  • Chain 'B':
    Compound: Isoaspartyl dipeptidase
    Species: Fervidobacterium islandicum [TaxId:2423]
    Gene: NA23_08080
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Isoaspartyl dipeptidase
    Species: Fervidobacterium islandicum [TaxId:2423]
    Gene: NA23_08080
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Isoaspartyl dipeptidase
    Species: Fervidobacterium islandicum [TaxId:2423]
    Gene: NA23_08080
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FWO, GOL, ZN, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7cf6A (A:)
mrgsmikiiknakvfspeyigkkdvifyhkvihvgegvntsvlpfeheiydangllllpg
lidphvhitggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksl
eseglntfiytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilriv
adirvggmisgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqgl
efakrggtidltalqpkdaefvraefttidaiceayenglldnvtissdgqgslpkfddn
gnfvgldvgsvsavwytirkvlekglplaevlkisttnparvfklnkgkiakgqdadfil
vdeqsfeivsviskgeflmkdgvmknlnfef

    Sequence, based on observed residues (ATOM records):
    >7cf6A (A:)
mrgsmikiiknakvfspeyigkkdvifyhkvihvgegvntsvlpfeheiydangllllpg
lidphvhitggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksl
eseglntfiytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilriv
adirvggmisgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqgl
efakrggtidltalqpkdefttidaiceayenglldnvtissdgqgslpkfddngnfvgl
dvgsvsavwytirkvlekglplaevlkisttnparvfklnkgkiakgqdadfilvdeqsf
eivsviskgeflmkdgvmknlnfe

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7cf6B (B:)
mrgsmikiiknakvfspeyigkkdvifyhkvihvgegvntsvlpfeheiydangllllpg
lidphvhitggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksl
eseglntfiytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilriv
adirvggmisgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqgl
efakrggtidltalqpkdaefvraefttidaiceayenglldnvtissdgqgslpkfddn
gnfvgldvgsvsavwytirkvlekglplaevlkisttnparvfklnkgkiakgqdadfil
vdeqsfeivsviskgeflmkdgvmknlnfef

    Sequence, based on observed residues (ATOM records):
    >7cf6B (B:)
mikiiknakvfspeyigkkdvifyhkvihvgegvfeheiydangllllpglidphvhitg
gggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksleseglntfiy
tgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilrivadirvggmis
gkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqglefakrggtid
ltalqpefttidaiceayenglldnvtissdgqgslpkfddngnfvgldvgsvsavwyti
rkvlekglplaevlkisttnparvfklnkgkiakgqdadfilvdeqsfeivsviskgefl
mkdgvmknlnfe

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7cf6C (C:)
mrgsmikiiknakvfspeyigkkdvifyhkvihvgegvntsvlpfeheiydangllllpg
lidphvhitggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksl
eseglntfiytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilriv
adirvggmisgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqgl
efakrggtidltalqpkdaefvraefttidaiceayenglldnvtissdgqgslpkfddn
gnfvgldvgsvsavwytirkvlekglplaevlkisttnparvfklnkgkiakgqdadfil
vdeqsfeivsviskgeflmkdgvmknlnfef

    Sequence, based on observed residues (ATOM records):
    >7cf6C (C:)
smikiiknakvfspeyigkkdvifyhkvihvgegvnfeheiydangllllpglidphvhi
tggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksleseglntf
iytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilrivadirvggm
isgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqglefakrggt
idltalqpkefttidaiceayenglldnvtissdgqgslpkfddvgldvgsvsavwytir
kvlekglplaevlkisttnparvfklnkgkiakgqdadfilvdeqsfeivsviskgeflm
kdgvmknlnfe

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7cf6D (D:)
mrgsmikiiknakvfspeyigkkdvifyhkvihvgegvntsvlpfeheiydangllllpg
lidphvhitggggeggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksl
eseglntfiytgsyrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilriv
adirvggmisgkagivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqgl
efakrggtidltalqpkdaefvraefttidaiceayenglldnvtissdgqgslpkfddn
gnfvgldvgsvsavwytirkvlekglplaevlkisttnparvfklnkgkiakgqdadfil
vdeqsfeivsviskgeflmkdgvmknlnfef

    Sequence, based on observed residues (ATOM records):
    >7cf6D (D:)
mikiiknakvfspeyigkkdvifyhkvihvgegvheiydangllllpglidphvhitggg
geggfetrtpelkisdcirsgvttvvgclgtdgitrslenlyakaksleseglntfiytg
syrvppvtftgsimrdivlidkvigvgeiaisdhrssqptleeilrivadirvggmisgk
agivnfhvgsgkrgieylfdiiekteipiqhlypthmsrsrklfeqglefakrggtidlt
alqpefttidaiceayenglldnvtissdgqgslpkfddngnfvgldvgsvsavwytirk
vlekglplaevlkisttnparvfklnkgkiakgqdadfilvdeqsfeivsviskgeflmk
dgvmknlnfe