PDB entry 7cae

View 7cae on RCSB PDB site
Description: mycobacterium smegmatis lpqy-sugabc complex in the resting state
Deposited on 2020-06-08, released 2020-12-02
The last revision was dated 2020-12-02, with a file datestamp of 2020-11-27.
Experiment type: EM
Resolution: 3.44 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ABC sugar transporter, permease component
    Species: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: sugA, MSMEI_4933
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ABC transporter, permease protein SugB
    Species: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_5059
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ABC transporter, ATP-binding protein SugC
    Species: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_5058
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R2C0
      • engineered mutation (163)
  • Chain 'D':
    Compound: ABC transporter, ATP-binding protein SugC
    Species: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_5058
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0R2C0
      • engineered mutation (163)
  • Chain 'E':
    Compound: Bacterial extracellular solute-binding protein
    Species: Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) [TaxId:246196]
    Gene: MSMEG_5061
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7caeA (A:)
    mtaavtpsasavasddkkserrlafwliapavllmlavtaypigyavwlslqrynlaeph
    dtefiglanyvtvltdgywwtafavtlgitvvsvaiefalglalalvmhrtifgkgavrt
    ailipygivtvaasyswyyawtpgtgylanllpegsapltdqlpslaivvlaevwkttpf
    mallllaglalvpqdllnaaqvdgagpwkrltkvilpmikpailvallfrtldafrifdn
    iyiltggsndtgsvsilgydnlfkafnvglgsaisvliflsvaiiafiyikifgaaapgs
    deevr
    

    Sequence, based on observed residues (ATOM records):
    >7caeA (A:)
    kkserrlafwliapavllmlavtaypigyavwlslqrynlaephdtefiglanyvtvltd
    gywwtafavtlgitvvsvaiefalglalalvmhrtifgkgavrtailipygivtvaasys
    wyyawtpgtgylanllpegsapltdqlpslaivvlaevwkttpfmallllaglalvpqdl
    lnaaqvdgagpwkrltkvilpmikpailvallfrtldafrifdniyiltggsndtgsvsi
    lgydnlfkafnvglgsaisvliflsvaiiafiyikifgaaap
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7caeB (B:)
    madrvdarratwwsvvnilvivyalipvlwilslslkptssvkdgklipteitfanykai
    fsgdaftsalfnsigiglittiiavviggmaayavarlqfpgkqlligvalliamfphis
    lvtpifnmwrgiglfdtwpgliipyitfalplaiytlsaffreipwdlekaakmdgatpa
    qafrkviaplaapgivtaailvfifawndlllalsltatqraitapvaianftgssqfee
    ptgsiaagamvitipiiifvlifqrrivagltsgavkg
    

    Sequence, based on observed residues (ATOM records):
    >7caeB (B:)
    arratwwsvvnilvivyalipvlwilslslkptssvkdgklipteitfanykaifsgdaf
    tsalfnsigiglittiiavviggmaayavarlqfpgkqlligvalliamfphislvtpif
    nmwrgiglfdtwpgliipyitfalplaiytlsaffreipwdlekaakmdgatpaqafrkv
    iaplaapgivtaailvfifawndlllalsltatqraitapvaianftgssqfeeptgsia
    agamvitipiiifvlifqrrivagltsgav
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7caeC (C:)
    maeivldrvtksypdgaggvraavkefsmtiadgefiilvgpsgcgksttlnmiagleei
    tsgelriggervnekapkdrdiamvfqsyalyphmtvrqniafpltlakvpkaeiaakve
    etakildlselldrkpgqlsggqrqrvamgraivrspkaflmdqplsnldaklrvqmrae
    isrlqdrlgtttvyvthdqteamtlgdrvvvmlagevqqigtpdelysspanlfvagfig
    spamnffpatrtdvgvrlpfgevtltphmldlldkqarpeniivgirpehiedsalldgy
    ariraltfsvradiveslgadkyvhfttegagaesaqlaelaadsgagtnqfiarvsads
    rvrtgeqielaidttklsifdaatglnltrditptdpteaagpdag
    

    Sequence, based on observed residues (ATOM records):
    >7caeC (C:)
    aeivldrvtksypraavkefsmtiadgefiilvgpsgcgksttlnmiagleeitsgelri
    ggervnekapkdrdiamvfqsyalyphmtvrqniafpltlakvpkaeiaakveetakild
    lselldrkpgqlsggqrqrvamgraivrspkaflmdqplsnldaklrvqmraeisrlqdr
    lgtttvyvthdqteamtlgdrvvvmlagevqqigtpdelysspanlfvagfigspamnff
    patrtdvgvrlpfgevtltphmldlldkqarpeniivgirpehiedsalldgyariralt
    fsvradiveslgadkyvhfttegagaesaqlaelaadsgagtnqfiarvsadsrvrtgeq
    ielaidttklsifdaatglnltrd
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7caeD (D:)
    maeivldrvtksypdgaggvraavkefsmtiadgefiilvgpsgcgksttlnmiagleei
    tsgelriggervnekapkdrdiamvfqsyalyphmtvrqniafpltlakvpkaeiaakve
    etakildlselldrkpgqlsggqrqrvamgraivrspkaflmdqplsnldaklrvqmrae
    isrlqdrlgtttvyvthdqteamtlgdrvvvmlagevqqigtpdelysspanlfvagfig
    spamnffpatrtdvgvrlpfgevtltphmldlldkqarpeniivgirpehiedsalldgy
    ariraltfsvradiveslgadkyvhfttegagaesaqlaelaadsgagtnqfiarvsads
    rvrtgeqielaidttklsifdaatglnltrditptdpteaagpdag
    

    Sequence, based on observed residues (ATOM records):
    >7caeD (D:)
    aeivldrvtksypraavkefsmtiadgefiilvgpsgcgksttlnmiagleeitsgelri
    ggervnekapkdrdiamvfqsyalyphmtvrqniafpltlakvpkaeiaakveetakild
    lselldrkpgqlsggqrqrvamgraivrspkaflmdqplsnldaklrvqmraeisrlqdr
    lgtttvyvthdqteamtlgdrvvvmlagevqqigtpdelysspanlfvagfigspamnff
    patrtdvgvrlpfgevtltphmldlldkqarpeniivgirpehiedsalldgyariralt
    fsvradiveslgadkyvhfttegagaesaqlaelaadsgagtnqfiarvsadsrvrtgeq
    ielaidttklsifdaatglnltrd
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7caeE (E:)
    mrarrlcaaavaamaaasmvsacgsqtggivinyytpaneeatfkavanrcneqlggrfq
    iaqrnlpkgaddqrlqlarrltgndksldvmaldvvwtaefaeagwavplsedpaglaea
    datentlpgpletarwqdelyaapittntqllwyradlmpappttwdgmldeanrlyreg
    gpswiavqgkqyegmvvwfntllqsaggqvlsddgqrvtltdtpehraatvkalriiksv
    atapgadpsitqtdentarlaleqgkaalevnwpyvlpsllenavkggvsflpldgdpal
    qgsindvgtfsptdeqfdiafdaskkvfgfapypgvnpdeparvtlgglnlavastsqhk
    aeafeairclrnvenqrytsiegglpavrtslyddpafqkkypqyeiirqqltnaavrpa
    tpvyqavstrmsatlapisdidpertadelteavqkaidgkglip
    

    Sequence, based on observed residues (ATOM records):
    >7caeE (E:)
    cgsqtggivinyytpaneeatfkavanrcneqlggrfqiaqrnlpkgaddqrlqlarrlt
    gndksldvmaldvvwtaefaeagwavplsedpaglaeadatentlpgpletarwqdelya
    apittntqllwyradlmpappttwdgmldeanrlyreggpswiavqgkqyegmvvwfntl
    lqsaggqvlsddgqrvtltdtpehraatvkalriiksvatapgadpsitqtdentarlal
    eqgkaalevnwpyvlpsllenavkggvsflpldgdpalqgsindvgtfsptdeqfdiafd
    askkvfgfapypgvnpdeparvtlgglnlavastsqhkaeafeairclrnvenqrytsie
    gglpavrtslyddpafqkkypqyeiirqqltnaavrpatpvyqavstrmsatlapisdid
    pertadelteavqkaidgkglip