PDB entry 7c6v

View 7c6v on RCSB PDB site
Description: crystal structure of beta-glycosides-binding protein (w177x) of abc transporter in a closed state bound to laminaritriose (form ii)
Deposited on 2020-05-22, released 2020-09-16
The last revision was dated 2020-10-14, with a file datestamp of 2020-10-09.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sugar ABC transporter, periplasmic sugar-binding protein
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Gene: TTHB082
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q53W80
      • engineered mutation (174-178)
  • Chain 'B':
    Compound: Sugar ABC transporter, periplasmic sugar-binding protein
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Gene: TTHB082
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q53W80 (Start-415)
      • engineered mutation (174-178)
  • Chain 'C':
    Compound: Sugar ABC transporter, periplasmic sugar-binding protein
    Species: Thermus thermophilus HB8 [TaxId:300852]
    Gene: TTHB082
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q53W80
      • engineered mutation (174-178)
  • Heterogens: CL, SO4, EDO, PEG, SO3, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7c6vA (A:)
mqktlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpd
ltqlgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselr
afyyrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtl
hnaapwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqie
adfqagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnl
alfnfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaa
qfgrtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqalrhhhh
hh

    Sequence, based on observed residues (ATOM records):
    >7c6vA (A:)
ktlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpdlt
qlgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselraf
yyrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtlhn
aapwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqiead
fqagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnlal
fnfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaaqf
grtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqal

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7c6vB (B:)
mqktlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpd
ltqlgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselr
afyyrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtl
hnaapwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqie
adfqagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnl
alfnfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaa
qfgrtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqalrhhhh
hh

    Sequence, based on observed residues (ATOM records):
    >7c6vB (B:)
tlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpdltq
lgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselrafy
yrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtlhna
apwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqieadf
qagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnlalf
nfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaaqfg
rtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqalr

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7c6vC (C:)
mqktlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpd
ltqlgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselr
afyyrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtl
hnaapwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqie
adfqagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnl
alfnfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaa
qfgrtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqalrhhhh
hh

    Sequence, based on observed residues (ATOM records):
    >7c6vC (C:)
tlevwimpnspqpaedfkalvapfekahgvevkvtvldwgvawtkittaatsgvgpdltq
lgttwvgaisamgvlepvddvlealggekaylpavwrttrlegarqatavpwfselrafy
yrtdalkaagvnpaemfaswqgfeaglarlkassfrdpetkaplaplctpgrtprtlhna
apwiwgaggeivrqaggrwqsalnspesleglyfflslaqkgyvpaeslekntaqieadf
qagkcavfasgpwmiqraqvpeakggfaertaaknlgvapypagpkgrytffggsnlalf
nfsknkplakellkylggpeaqvryaqmtgmlpalrsawsdpsfqqnpllrtfiqaaqfg
rtypslagwggvenlavqhlgmawdlvaqgrltrealkdlmdkasaainqal