PDB entry 7c2t

View 7c2t on RCSB PDB site
Description: helical reconstruction of zika virus complexed with fab c10
Deposited on 2020-05-09, released 2020-07-08
The last revision was dated 2020-07-08, with a file datestamp of 2020-07-03.
Experiment type: EM
Resolution: N/A
R-factor: N/A
AEROSPACI score: -0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: envelope protein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: m protein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Heavy chain from Fab C10
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7C2T (0-126)
  • Chain 'L':
    Compound: Light chain from Fab C10
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7C2T (0-108)
  • Chain 'N':
    Compound: envelope protein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: m protein
    Species: Zika virus [TaxId:64320]
    Database cross-references and differences (RAF-indexed):
  • Chain 'V':
    Compound: Heavy chain from Fab C10
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7C2T (0-126)
  • Chain 'W':
    Compound: Light chain from Fab C10
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7C2T (0-108)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7c2tB (B:)
    ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
    yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
    cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
    ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
    alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
    kgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlit
    anpvitestenskmmleldppfgdsyivigvgekkithhwhrsgstigkafeatvrgakr
    mavlgdtawdfgsvggalnslgkgihqifgaafkslfggmswfsqiligtllmwlglntk
    ngsislmclalggvliflstavsa
    

    Sequence, based on observed residues (ATOM records):
    >7c2tB (B:)
    ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
    yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
    cskkmtgksiqpenleyrimlsvhgsqhsgdenrakveitpnspraeatlggfgslgldc
    eprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnkealvefkdaha
    krqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgvsyslcta
    aftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitanpviteste
    nskmmleldppfgdsyivigvgekkithhwhrsgstigkafeatvrgakrmavlgdtawd
    fgsvggalnslgkgihqifgaafkslfggmswfsqiligtllmwlglntkngsislmcla
    lggvliflstavsa
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tE (E:)
    avtlpshstrklqtrsqtwlesreytkhlirvenwifrnpgfalaaaaiawllgsstsqk
    viylvmilliapays
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tK (K:)
    evqlvesgaevkkpgasvkvsckasgytftsyamhwvrqapgqrlewmgwinagngntky
    sqkfqdrvtitrdtsastaymelsslrsedtaiyycardkvddygdywfptlwyfdywgq
    gtlvtvs
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tL (L:)
    saltqpasvsgspgqsitisctgtssdvggfnyvswfqqhpgkapklmlydvtsrpsgvs
    srfsgsksgntasltisglqaedeadyycsshtsrgtwvfgggtkltvl
    

  • Chain 'N':
    Sequence, based on SEQRES records:
    >7c2tN (N:)
    ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
    yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
    cskkmtgksiqpenleyrimlsvhgsqhsgmivndtghetdenrakveitpnspraeatl
    ggfgslgldceprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnke
    alvefkdahakrqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrl
    kgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlit
    anpvitestenskmmleldppfgdsyivigvgekkithhwhrsgstigkafeatvrgakr
    mavlgdtawdfgsvggalnslgkgihqifgaafkslfggmswfsqiligtllmwlglntk
    ngsislmclalggvliflstavsa
    

    Sequence, based on observed residues (ATOM records):
    >7c2tN (N:)
    ircigvsnrdfvegmsggtwvdvvlehggcvtvmaqdkptvdielvtttvsnmaevrsyc
    yeasisdmasdsrcptqgeayldkqsdtqyvckrtlvdrgwgngcglfgkgslvtcakfa
    cskkmtgksiqpenleyrimlsvhgsqhsgdenrakveitpnspraeatlggfgslgldc
    eprtgldfsdlyyltmnnkhwlvhkewfhdiplpwhagadtgtphwnnkealvefkdaha
    krqtvvvlgsqegavhtalagaleaemdgakgrlssghlkcrlkmdklrlkgvsyslcta
    aftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitanpviteste
    nskmmleldppfgdsyivigvgekkithhwhrsgstigkafeatvrgakrmavlgdtawd
    fgsvggalnslgkgihqifgaafkslfggmswfsqiligtllmwlglntkngsislmcla
    lggvliflstavsa
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tQ (Q:)
    avtlpshstrklqtrsqtwlesreytkhlirvenwifrnpgfalaaaaiawllgsstsqk
    viylvmilliapays
    

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tV (V:)
    evqlvesgaevkkpgasvkvsckasgytftsyamhwvrqapgqrlewmgwinagngntky
    sqkfqdrvtitrdtsastaymelsslrsedtaiyycardkvddygdywfptlwyfdywgq
    gtlvtvs
    

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records:
    >7c2tW (W:)
    saltqpasvsgspgqsitisctgtssdvggfnyvswfqqhpgkapklmlydvtsrpsgvs
    srfsgsksgntasltisglqaedeadyycsshtsrgtwvfgggtkltvl