PDB entry 7bxo

View 7bxo on RCSB PDB site
Description: crystal structure of the toxin-antitoxin with amp-pnp
Deposited on 2020-04-20, released 2020-09-30
The last revision was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: XRAY
Resolution: 2.77 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Toxin-antitoxin system antidote Mnt family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3165
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (Start-132)
      • engineered mutation (103)
  • Chain 'C':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (Start-132)
      • engineered mutation (103)
  • Chain 'D':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (0-132)
      • engineered mutation (103)
  • Chain 'E':
    Compound: Toxin-antitoxin system antidote Mnt family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3165
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (0-End)
      • engineered mutation (103)
  • Chain 'G':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (Start-132)
      • engineered mutation (103)
  • Chain 'H':
    Compound: Toxin-antitoxin system toxin HepN family
    Species: Shewanella oneidensis (strain MR-1) [TaxId:211586]
    Gene: SO_3166
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ECH6 (Start-132)
      • engineered mutation (103)
  • Heterogens: ANP, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7bxoA (A:)
mqqlnenkiikllrdnipklqliylfgsysqgtqhrnsdidiavlaadtldniarwelaq
klasaldsdvdlvdlrsastvlcqqvvtqgkqlwgtqqddelfavktismyqhlqaerqa
iiddvmantaakahrgesl

    Sequence, based on observed residues (ATOM records):
    >7bxoA (A:)
lnenkiikllrdnipklqliylfgsysqgtqhrnsdidiavlaadtldniarwelaqkla
saldsdvdlvdlrsastvlcqqvvtqgkqlwgtqqddelfavktismyqhlqaerqaiid
dvma

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7bxoB (B:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoB (B:)
ndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrqq
qlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhle
dfeqfidvikae

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7bxoC (C:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoC (C:)
ndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrqq
qlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhle
dfeqfidvikae

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7bxoD (D:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoD (D:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdanldivvhvvqhhledf
eqfidvikae

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7bxoE (E:)
mqqlnenkiikllrdnipklqliylfgsysqgtqhrnsdidiavlaadtldniarwelaq
klasaldsdvdlvdlrsastvlcqqvvtqgkqlwgtqqddelfavktismyqhlqaerqa
iiddvmantaakahrgesl

    Sequence, based on observed residues (ATOM records):
    >7bxoE (E:)
qlnenkiikllrdnipklqliylfgsysqgtqhrnsdidiavlaadtldniarwelaqkl
asaldsdvdlvdlrsastvlcqqvvtqgkqlwgtqqddelfavktismyqhlqaerqaii
ddvma

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7bxoF (F:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoF (F:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvik

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7bxoG (G:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoG (G:)
diiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrqqq
lgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhled
feqfidvikae

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7bxoH (H:)
mndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrq
qqlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqelnldivvhvvqhhl
edfeqfidvikae

    Sequence, based on observed residues (ATOM records):
    >7bxoH (H:)
ndiiinkiatikrcikriqqvygdgsqfkqdftlqdsvilnlqrcceacidianhinrqq
qlgipqssrdsftllaqnnlitqplsdnlkkmvglrniavhdaqldivvhvvqhhledfe
qfidvikae