PDB entry 7bwk

View 7bwk on RCSB PDB site
Description: structure of dotl(656-783)-icms-icmw-lvga-vpdb(461-590) derived from legionella pneumophila
Deposited on 2020-04-14, released 2020-06-03
The last revision was dated 2020-06-10, with a file datestamp of 2020-06-05.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: IcmO (DotL)
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmO, lpg0446
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: IcmS
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmS, lpg0442
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: IcmW
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmW, lpg2688
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Hypothetical virulence protein
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: lpg0525
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: PNPLA domain-containing protein
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: lpg1227
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: IcmO (DotL)
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmO, lpg0446
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: IcmS
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmS, lpg0442
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: IcmW
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: icmW, lpg2688
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Hypothetical virulence protein
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: lpg0525
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: PNPLA domain-containing protein
    Species: Legionella pneumophila subsp. pneumophila str. Philadelphia 1 [TaxId:272624]
    Gene: lpg1227
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7bwkA (A:)
gqnepepvediveeevegaltifsklridpnappilvadkevfsepllpinetrnqmiti
erlagakdkyagtvanelikdfqiatsyppeerdvidvqeltgiirdlsakisaerekan
kkaaeelt

    Sequence, based on observed residues (ATOM records):
    >7bwkA (A:)
veeevegaltifsklridpnappilvadkevfsepllpinetrnqmitierlagakdkya
gtvanelikdfqiatsyppeerdvidvqeltgiirdlsakisaerekankkaa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7bwkB (B:)
merdiskcmakiaasmnakfylndrfvsfdevfsetgllpaiakradqlcslclgyglga
tydesegallgirvvfdevtpnvlrllcmtdvmneliqggpsrdytpldelmyd

    Sequence, based on observed residues (ATOM records):
    >7bwkB (B:)
erdiskcmakiaasmnakfylndrfvsfdevfsetgllpaiakradqlcslclgyglgat
ydesegallgirvvfdevtpnvlrllcmtdvmneliqggpsrdytpldelmyd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7bwkC (C:)
mpdlsheasakywfeyldpmiyrvitfmesvenwtldgnpeleeamkqlgqelddiekid
lgllaeedkfirivgniksgrglrllqaidtvhpgsasrvlihaeetslsssdpagfflk
rnivferlrllsrvfcqyrlklvlralegde

    Sequence, based on observed residues (ATOM records):
    >7bwkC (C:)
pdlsheasakywfeyldpmiyrvitfmesvenwtldgnpeleeamkqlgqelddiekidl
gllaeedkfirivgniksgrglrllqaidtvhpgsasrvlihaeetslsssdpagfflkr
nivferlrllsrvfcqyrlklvlralegd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7bwkD (D:)
madgdieikagfvdtdlddrkltmiddlnnplaivervyliwwhwadfhlhvisphidti
tpaiviepelipgsndhefvysihdsgsklstsksqdmfsagmsmcklfytiekmvyilv
erlksggvsmeaevqiafagheiaqrkafesiinlpynvvvtnfdpgiwgekylqnvkrl
adkgygyppesprkiymhpvssgttark

    Sequence, based on observed residues (ATOM records):
    >7bwkD (D:)
ddlnnplaivervyliwwhwadfhlhvisphidtitpaiviepelipgsndhefvysihd
sgsklstsksqdmfsagmsmcklfytiekmvyilverlksggvsmeaevqiafagheiaq
rkafesiinlpynvvvtnfdpgiwgekylqnvkrladkgygyppesprkiymhpvssgtt
a

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7bwkE (E:)
nssqqqeqlkektmlfksrlqsfkqgegvkpwsqhvenaidrlmslkgeitkaqvdlgrt
wfdiksenadpavrlkkfndaflasplakpssnqqeinfskeirkeidllkglpglnnts
shcteefneq

    Sequence, based on observed residues (ATOM records):
    >7bwkE (E:)
ssqqqeqlkektmlfksrlqsfkqgegvkpwsqhvenaidrlmslkgeitkaqvdlgrtw
fdiksenadpavrlkkfndaflasplakpssnqqeinfskeirkeidllkglpgln

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7bwkF (F:)
gqnepepvediveeevegaltifsklridpnappilvadkevfsepllpinetrnqmiti
erlagakdkyagtvanelikdfqiatsyppeerdvidvqeltgiirdlsakisaerekan
kkaaeelt

    Sequence, based on observed residues (ATOM records):
    >7bwkF (F:)
eevegaltifsklridpnappilvadkevfsepllpinetrnqmitierlagakdkyagt
vanelikdfqiatsyppeerdvidvqeltgiirdlsakisaerekankkaa

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7bwkG (G:)
merdiskcmakiaasmnakfylndrfvsfdevfsetgllpaiakradqlcslclgyglga
tydesegallgirvvfdevtpnvlrllcmtdvmneliqggpsrdytpldelmyd

    Sequence, based on observed residues (ATOM records):
    >7bwkG (G:)
erdiskcmakiaasmnakfylndrfvsfdevfsetgllpaiakradqlcslclgyglgat
ydesegallgirvvfdevtpnvlrllcmtdvmneliqggpsrdytpldelmyd

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7bwkH (H:)
mpdlsheasakywfeyldpmiyrvitfmesvenwtldgnpeleeamkqlgqelddiekid
lgllaeedkfirivgniksgrglrllqaidtvhpgsasrvlihaeetslsssdpagfflk
rnivferlrllsrvfcqyrlklvlralegde

    Sequence, based on observed residues (ATOM records):
    >7bwkH (H:)
pdlsheasakywfeyldpmiyrvitfmesvenwtldgnpeleeamkqlgqelddiekidl
gllaeedkfirivgniksgrglrllqaidtvhpgsasrvlihaeetslsssdpagfflkr
nivferlrllsrvfcqyrlklvlralegd

  • Chain 'I':
    Sequence, based on SEQRES records:
    >7bwkI (I:)
madgdieikagfvdtdlddrkltmiddlnnplaivervyliwwhwadfhlhvisphidti
tpaiviepelipgsndhefvysihdsgsklstsksqdmfsagmsmcklfytiekmvyilv
erlksggvsmeaevqiafagheiaqrkafesiinlpynvvvtnfdpgiwgekylqnvkrl
adkgygyppesprkiymhpvssgttark

    Sequence, based on observed residues (ATOM records):
    >7bwkI (I:)
iddlnnplaivervyliwwhwadfhlhvisphidtitpaiviepelipgsndhefvysih
dsgsklstsksqdmfsagmsmcklfytiekmvyilverlksggvsmeaevqiafagheia
qrkafesiinlpynvvvtnfdpgiwgekylqnvkrladkgygyppesprkiymhpvssgt
t

  • Chain 'J':
    Sequence, based on SEQRES records:
    >7bwkJ (J:)
nssqqqeqlkektmlfksrlqsfkqgegvkpwsqhvenaidrlmslkgeitkaqvdlgrt
wfdiksenadpavrlkkfndaflasplakpssnqqeinfskeirkeidllkglpglnnts
shcteefneq

    Sequence, based on observed residues (ATOM records):
    >7bwkJ (J:)
nssqqqeqlkektmlfksrlqsfkqgegvkpwsqhvenaidrlmslkgeitkaqvdlgrt
wfdiksenadpavrlkkfndaflasplakpssnqqeinfskeirkeidllkglpgl