PDB entry 7bv6

View 7bv6 on RCSB PDB site
Description: Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
Class: signaling protein
Keywords: Autophagy, Synatxin 17, GABARAP, SIGNALING PROTEIN
Deposited on 2020-04-09, released 2020-09-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-16, with a file datestamp of 2020-09-11.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6a_
  • Chain 'B':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6b_
  • Chain 'C':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6e_
  • Chain 'F':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6f_
  • Chain 'G':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6i_
  • Chain 'J':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6j_
  • Chain 'K':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6m_
  • Chain 'N':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6n_
  • Chain 'O':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6q_
  • Chain 'R':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6r_
  • Chain 'S':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'U':
    Compound: Vesicle-associated membrane protein 8
    Species: Homo sapiens [TaxId:9606]
    Gene: VAMP8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6u_
  • Chain 'V':
    Compound: Syntaxin-17
    Species: Homo sapiens [TaxId:9606]
    Gene: STX17
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d7bv6v_
  • Chain 'W':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: Synaptosomal-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: SNAP29
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7bv6A (A:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6A (A:)
gndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvark
fwwknv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >7bv6B (B:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6B (B:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlgkaaky
k

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >7bv6E (E:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6E (E:)
ndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvarkf
wwknv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >7bv6F (F:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6F (F:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlgkaaky
k

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >7bv6I (I:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6I (I:)
gndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvark
fwwknv

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >7bv6J (J:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6J (J:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlgkaak

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.

  • Chain 'M':
    Sequence, based on SEQRES records: (download) 
    >7bv6M (M:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6M (M:)
gndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvark
fwwknv

  • Chain 'N':
    Sequence, based on SEQRES records: (download) 
    >7bv6N (N:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6N (N:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlgkaaky

  • Chain 'O':
    No sequence available.

  • Chain 'P':
    No sequence available.

  • Chain 'Q':
    Sequence, based on SEQRES records: (download) 
    >7bv6Q (Q:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6Q (Q:)
gndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvark
f

  • Chain 'R':
    Sequence, based on SEQRES records: (download) 
    >7bv6R (R:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6R (R:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlg

  • Chain 'S':
    No sequence available.

  • Chain 'T':
    No sequence available.

  • Chain 'U':
    Sequence, based on SEQRES records: (download) 
    >7bv6U (U:)
ggndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvar
kfwwknvk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6U (U:)
gndrvrnlqsevegvknimtqnverilargenlehlrnktedleatsehfkttsqkvark
fwwknv

  • Chain 'V':
    Sequence, based on SEQRES records: (download) 
    >7bv6V (V:)
htteaeassqsltqiyalpeipqdqnaaeswetleadlielsqlvtdfsllvnsqqekid
siadhvnsaavnveegtknlgkaakyk

    Sequence, based on observed residues (ATOM records): (download) 
    >7bv6V (V:)
aaeswetleadlielsqlvtdfsllvnsqqekidsiadhvnsaavnveegtknlgkaaky

  • Chain 'W':
    No sequence available.

  • Chain 'X':
    No sequence available.