PDB entry 7btq

View 7btq on RCSB PDB site
Description: ecor124i-dna in the restriction-alleviation state
Deposited on 2020-04-02, released 2020-05-27
The last revision was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: EM
Resolution: 4.54 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Type I restriction enzyme EcoR124II M protein
    Species: Escherichia coli [TaxId:562]
    Gene: hsdM, hsm
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (64-mer)
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'C':
    Compound: DNA (64-mer)
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'D':
    Compound: Type I restriction enzyme EcoR124II M protein
    Species: Escherichia coli [TaxId:562]
    Gene: hsdM, hsm
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Type-1 restriction enzyme EcoR124II specificity protein
    Species: Escherichia coli [TaxId:562]
    Gene: hsdS, hss
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Type I restriction enzyme R Protein
    Species: Escherichia coli [TaxId:562]
    Gene: hsdR
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7btqA (A:)
    mkmtsiqqraelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagddsi
    cyaklddsvitddikddaiktkgyfiypsqlfcnvaakantndrlnadlnsifvaiessa
    ygypseadikglfadfdttsnrlgntvkdknarlaavlkgveglklgdfnehqidlfgda
    yeflisnyaanagksggefftpqhvskliaqlamhgqthvnkiydpaagsgslllqakkq
    fdnhiieegffgqeinhttynlarmnmflhninydkfdiklgntltephfrdekpfdaiv
    snppysvkwigsddptlinderfapagvlapkskadfafvlhalnylsakgraaivcfpg
    ifyrggaeqkirqylvdnnyvetvislapnlffgttiavnilvlskhktdtnvqfidase
    lfkketnnniltdahieqimqvfaskedvahlaksvafetvvandynlsvssyveakdnr
    eiidiaelnaelkttvskidqlrkdidaivaeiegcevqk
    

    Sequence, based on observed residues (ATOM records):
    >7btqA (A:)
    aelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagtddikddaiktkg
    yfiypsqlfcnvaakantndrlnadlnsifvaiessaygypseadikglfadfdttsnrl
    gntvkdknarlaavlkgveglklgidlfgdayeflisnyaaefftpqhvskliaqlamhg
    qthvnkiydpaagsgslllqakkqfdnhiieegffgqeinhttynlarmnmflhninydk
    fdiklgntltephfrdekpfdaivsnppysvkwigsddptlinderfapagvlapkskad
    fafvlhalnylsakgraaivcfpgifyrggaeqkirqylvdnnyvetvislapnlffgtt
    iavnilvlskhktdtnvqfidaselfkketnnniltdahieqimqvfaskedvahlaksv
    afetvvandynlsvssyveakdnreiidiaelnaelkttvskidqlrkdidaiv
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7btqD (D:)
    mkmtsiqqraelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagddsi
    cyaklddsvitddikddaiktkgyfiypsqlfcnvaakantndrlnadlnsifvaiessa
    ygypseadikglfadfdttsnrlgntvkdknarlaavlkgveglklgdfnehqidlfgda
    yeflisnyaanagksggefftpqhvskliaqlamhgqthvnkiydpaagsgslllqakkq
    fdnhiieegffgqeinhttynlarmnmflhninydkfdiklgntltephfrdekpfdaiv
    snppysvkwigsddptlinderfapagvlapkskadfafvlhalnylsakgraaivcfpg
    ifyrggaeqkirqylvdnnyvetvislapnlffgttiavnilvlskhktdtnvqfidase
    lfkketnnniltdahieqimqvfaskedvahlaksvafetvvandynlsvssyveakdnr
    eiidiaelnaelkttvskidqlrkdidaivaeiegcevqk
    

    Sequence, based on observed residues (ATOM records):
    >7btqD (D:)
    aelhrqiwqiandvrgsvdgwdfkqyvlgalfyrfisenfssyieagtddikddaiktkg
    yfiypsqlfcnvaakantndrlnadlnsifvaiessaygypseadikglfadfdttsnrl
    gntvkdknarlaavlkgveglklgidlfgdayeflisnyaaefftpqhvskliaqlamhg
    qthvnkiydpaagsgslllqakkqfdnhiieegffgqeinhttynlarmnmflhninydk
    fdiklgntltephfrdekpfdaivsnppysvkwigsddptlinderfapagvlapkskad
    fafvlhalnylsakgraaivcfpgifyrggaeqkirqylvdnnyvetvislapnlffgtt
    iavnilvlskhktdtnvqfidaselfkketnnniltdahieqimqvfaskedvahlaksv
    afetvvandynlsvssyveakdnreiidiaelnaelkttvskidqlrkdidaiv
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7btqE (E:)
    msemsyleklldgvevewlplgeitkyeqptkylvkakdyhdtytipvltagktfilgyt
    nethgiyqaskapviifddfttankwvdfdfkakssamkmvtscddnktllkyvyywlnt
    lpsefaegdhkrqwisnysqkkipipcpdnpekslaiqseivrildkftaltaeltaeln
    mrkkqynyyrdqllsfkegevewktlgeigkwygggtpsknkiefwengsipwispkdmg
    rtlvdssedyiteeavlhsstklipansiaivvrssildkvlpsalikvpatlnqdmkav
    iphenilvkyiyhmigsrgsdilraakktggsvasidskklfsfkipvpnineqqrivei
    ldkfdtltnsiteglpreielrqkqyeyyrdllfsfpkpetvsn
    

    Sequence, based on observed residues (ATOM records):
    >7btqE (E:)
    gvevewlplgeitkyeqptkylvkakdyhdtytipvltagktfilgytnethgiyqaska
    pviifddfttankwvdfdfkakssamkmvtscddnktllkyvyywlntlpsefaegdhkr
    qwisnysqkkipipcpdnpekslaiqseivrildkftaltaeltaelnmrkkqynyyrdq
    llsfkegevewktlgeigkwygggtpsknkiefwengsipwispkdmgrtlvdssedyit
    eeavlhsstklipansiaivvrssildkvlpsalikvpatlnqdmkaviphenilvkyiy
    hmigsrgsdilraakktggsvasidskklfsfkipvpnineqqriveildkfdtltnsit
    eglpreielrqkqyeyyrdllfsf
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7btqF (F:)
    mthqthtiaesnnfivldkyikaeptgdsyqsesdlereliqdlrnqgyefisvksqsam
    lanvreqlqnlngvvfndsewrrfteqyldnpsdgildktrkihidyicdfifdderlen
    iylidkknlmrnkvqiiqqfeqagshanrydvtilvnglplvqielkkrgvaireafnqi
    hryskesfnsenslfkylqlfvisngtdtryfanttkrdknsfdftmnwaksdntlikdl
    kdftatcfqkhtllnvlvnysvfdssqtllvmrpyqiaaterilwkikssftaknwskpe
    sggyiwhttgsgktltsfkaarlateldfidkvffvvdrkdldyqtmkeyqrfspdsvng
    sentaglkrnldkddnkiivttiqklnnlmkaesdlpvynqqvvfifdechrsqfgeaqk
    nlkkkfkryyqfgftgtpifpenalgsettasvfgrelhsyvitdairdekvlkfkvdyn
    dvrpqfksletetdekklsaaenqqaflhpmriqeitqyilnnfrqkthrtfpgskgfna
    mlavssvdaakayyatfkrlqeeaanksatykplriatifsfaaneeqnaigeisdetfd
    tsamdssakefldaaireynshfktnfstdsngfqnyyrdlaqrvknqdidllivvgmfl
    tgfdaptlntlfvdknlryhglmqafsrtnriydatktfgnivtfrdlerstidaitlfg
    dkntknvvleksyteymegftdaatgeakrgfmtvvseleqrfpdptsiesekekkdfvk
    lfgeylraenilqnydefatlkalqqidlsdpvavekfkaehyvddekfaelqtirlpad
    rkiqdyrsayndirdwqrrekeaekkeksttdwddvvfevdllksqeinldyilglifeh
    nrqnkgkgemieevkrlirsslgnrakeglvvdfiqqtnlddlpdkasiidafftfaqre
    qqreaealikeenlnedaakryirtslkreyatengtelnetlpklsplnpqyktkkqav
    fqkivsfiekfkgvggki
    

    Sequence, based on observed residues (ATOM records):
    >7btqF (F:)
    nfivldkyikaeptgdsyqsesdlereliqdlrnqgyefisvksqsamlanvreqlqnln
    gvvfndsewrrfteqyldnpsdgildktrkihidyicdfifdderleniylidkknlmrn
    kvqiiqqfenrydvtilvnglplvqielkkrgvaireafnqienslfkylqlfvisngtd
    tryfanttkrdknsfdftmnwaksdntlikdlkdftatcfqkhtllnvlvnysvfdssqt
    llvmrpyqiaaterilwkikssftaknwskpesggyiwhttgsgktltsfkaarlateld
    fidkvffvvdrkdldyqtmkeyqrfspdsvngsentaglkrnldkddnkiivttiqklnn
    lmkaesdlpvynqqvvfifdechrsqfgeaqknlkkkfkryyqfgftgtpifpenalgse
    ttasvfgrelhsyvitdairdekvlkfkvdyndvrpqfksletetdekklsaaenqqafl
    hpmriqeitqyilnnfrqkthrtfpgskgfnamlavssvdaakayyatfkrlqeeaanks
    atykplriatifsfaaneeqnaigeisdetfdtsamdssakefldaaireynshfktnfs
    tdsngfqnyyrdlaqrvknqdidllivvgmfltgfdaptlntlfvdknlryhglmqafsr
    tnriydatktfgnivtfrdlerstidaitlfgdkntknvvleksyteymegftdaatgea
    krgfmtvvseleqrfpdptsiesekekkdfvklfgeylraenilqnydefatlkalqqid
    lsdpvavekfkaehyvddekfaelqtirlpadrkiqdyrsayndirdwqrrekdwddvvf
    evdllksqeinldyilglifehnrgemieevkrlirsslgnrakeglvvdfiqqtnlddl
    pdkasiidafftfaqreqqreaealikeenlnedaakryirtslkreyatengtelnetl
    pklsplnpqyktkkqavfqkivsfiekfkgvg