PDB entry 7bp4

View 7bp4 on RCSB PDB site
Description: structural insights into nucleosome reorganization by nap1-related protein 1 (nrp1)
Deposited on 2020-03-21, released 2020-11-11
The last revision was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone H2A.6
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: RAT5, H2A-1, At5g54640, MRB17.14
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Histone H2B.1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At1g07790, F24B9.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: asp-asp-asp-asp-tyr
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7BP4 (0-4)
  • Chain 'G':
    Compound: Histone H2A.6
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: RAT5, H2A-1, At5g54640, MRB17.14
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Histone H2B.1
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At1g07790, F24B9.10
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: asp-asp-asp-asp-tyr
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 7BP4 (0-4)
  • Heterogens: GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7bp4A (A:)
kkatsrsskaglqfpvgriarflkagkyaervgagapvylaavleylaaevlelagnaar
dnkktrivprhiqlavrndeelskllgdvtian

    Sequence, based on observed residues (ATOM records):
    >7bp4A (A:)
aglqfpvgriarflkagkyaervgagapvylaavleylaaevlelagnaardnkktrivp
rhiqlavrndeelskllgdvtia

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7bp4B (B:)
kkrskknvetykiyifkvlkqvhpdigisskamgimnsfindifeklaqessklarynkk
ptitsreiqtavrlvlpgelakhavsegtkavtkftss

    Sequence, based on observed residues (ATOM records):
    >7bp4B (B:)
etykiyifkvlkqvhpdigisskamgimnsfindifeklaqessklarynkkptitsrei
qtavrlvlpgelakhavsegtkavtkfts

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >7bp4C (C:)
ddddy

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7bp4G (G:)
kkatsrsskaglqfpvgriarflkagkyaervgagapvylaavleylaaevlelagnaar
dnkktrivprhiqlavrndeelskllgdvtian

    Sequence, based on observed residues (ATOM records):
    >7bp4G (G:)
aglqfpvgriarflkagkyaervgagapvylaavleylaaevlelagnaardnkktrivp
rhiqlavrndeelskllgdvti

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7bp4H (H:)
kkrskknvetykiyifkvlkqvhpdigisskamgimnsfindifeklaqessklarynkk
ptitsreiqtavrlvlpgelakhavsegtkavtkftss

    Sequence, based on observed residues (ATOM records):
    >7bp4H (H:)
tykiyifkvlkqvhpdigisskamgimnsfindifeklaqessklarynkkptitsreiq
tavrlvlpgelakhavsegtkavtkfts

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >7bp4L (L:)
ddddy