PDB entry 7blr

View 7blr on RCSB PDB site
Description: vps35/vps29 arch of fungal membrane-assembled retromer:vps5 (snx-bar) complex.
Deposited on 2021-01-18, released 2021-02-10
The last revision was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: EM
Resolution: 9.3 Å
R-factor: N/A
AEROSPACI score: -0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vacuolar protein sorting-associated protein 35
    Species: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) [TaxId:759272]
    Gene: CTHT_0035730
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) [TaxId:759272]
    Gene: CTHT_0002370
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0RZB5 (1-End)
      • expression tag (0)
  • Chain 'C':
    Compound: Vacuolar protein sorting-associated protein 35
    Species: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) [TaxId:759272]
    Gene: CTHT_0035730
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) [TaxId:759272]
    Gene: CTHT_0002370
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0RZB5 (1-End)
      • expression tag (0)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7blrA (A:)
mstpappeeqarlledaliavrqqtammrkfldtpgklmdalkccstlvselrtsslspk
qyyelymavfdalrylsahlrenhpvnhladlyelvqyagniiprlylmitvgtaymsid
gapvkelmkdmmdmsrgvqhpvrglflryylsgqardylptgdsdgpegnlqdsinfilt
nfvemnklwvrlqhqghsrerdlrtqerrelqllvgsnivrlsqlvdlptyrdsilgpll
eqivqcrdilaqeyllevitqvfpdeyhlhtldqflgavsrlnphvnvkaivigmmnrls
dyaeresqnepeedrakleeealakllektklgqnselepqngdhpdtevssttdsaqap
stadsdttavngeeepvrkrrgipvnvplydiffdqvqhlvqaqhlpiqdtialccslan
lslniyperldyvdgilayalakvkehansadlhsqpaqqsllsllqsplrryvsiftal
slptyvslfqaqtyptrraiageivrtllknqtlistpahlenvleilkvlikegsqppa
gypgvvqprarpletdetmeeqgwlarlvhlihsddndtqfrllqmtrkayaegnerirt
ttpplitaglklarrfkarehyddnwssqssslfkflhsaistlytrvngpgvadlclrl
fcscgqvadmtefeevayeffaqaftvyeesisdskaqfqavcviasalhrtrnfgreny
dtlitkcaqhaskllrkpdqcravylashlwwatpiaargetedtelyrdgkrvleclqr
alrvadscmetatsielfveildryvyyfdqrnesvttkylnglielihsnlagnqqdsa
sveasrkhfiqtlemiqskefegivvapk

    Sequence, based on observed residues (ATOM records):
    >7blrA (A:)
rlledaliavrqqtammrkfldtpgklmdalkccstlvselrtsslspkqyyelymavfd
alrylsahlrenhpvnhladlyelvqyagniiprlylmitvgtaymsidgapvkelmkdm
mdmsrgvqhpvrglflryylsgqardylptgdsdgpegnlqdsinfiltnfvemnklwvr
lqhqghsrerdlrtqerrelqllvgsnivrlsqlvdlptyrdsilgplleqivqcrdila
qeyllevitqvfpdeyhlhtldqflgavsrlnphvnvkaivigmmnrlsdyaerevplyd
iffdqvqhlvqaqhlpiqdtialccslanlslniyperldyvdgilayalakvkehansa
dlhsqpaqqsllsllqsplrryvsiftalslptyvslfqaqtyptrraiageivrtllkn
qtlistpahlenvleilkvlikegetdetmeeqgwlarlvhlihsddndtqfrllqmtrk
ayaegnerirtttpplitaglklarrfkarehyddnwssqssslfkflhsaistlytrvn
gpgvadlclrlfcscgqvadmtefeevayeffaqaftvyeesisdskaqfqavcviasal
hrtrnfgrenydtlitkcaqhaskllrkpdqcravylashlwwatpiaargetedtelyr
dgkrvleclqralrvadscmetatsielfveildryvyyfdqrnesvttkylnglielih
snlagnqqdsasveasrkhfiqtlemiq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7blrB (B:)
smaflilvignlhipdraldippkfkkllspgkisqtlclgnltdratydylrsispdlk
ivrgrmdveatslplmqvvthgslrigflegftlvseepdvllaeankldvdvlcwaggs
hrfecfeymdkffvnpgsatgafttdwlaegeevvpsfclmdvqgisltlyvyqlrkden
gtenvavekvtytkpveptgas

    Sequence, based on observed residues (ATOM records):
    >7blrB (B:)
smaflilvignlhipdraldippkfkkllspgkisqtlclgnltdratydylrsispdlk
ivrgrmdveatslplmqvvthgslrigflegftlvseepdvllaeankldvdvlcwaggs
hrfecfeymdkffvnpgsatgafttdwvvpsfclmdvqgisltlyvyqlrkdtenvavek
vtytkpv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7blrC (C:)
mstpappeeqarlledaliavrqqtammrkfldtpgklmdalkccstlvselrtsslspk
qyyelymavfdalrylsahlrenhpvnhladlyelvqyagniiprlylmitvgtaymsid
gapvkelmkdmmdmsrgvqhpvrglflryylsgqardylptgdsdgpegnlqdsinfilt
nfvemnklwvrlqhqghsrerdlrtqerrelqllvgsnivrlsqlvdlptyrdsilgpll
eqivqcrdilaqeyllevitqvfpdeyhlhtldqflgavsrlnphvnvkaivigmmnrls
dyaeresqnepeedrakleeealakllektklgqnselepqngdhpdtevssttdsaqap
stadsdttavngeeepvrkrrgipvnvplydiffdqvqhlvqaqhlpiqdtialccslan
lslniyperldyvdgilayalakvkehansadlhsqpaqqsllsllqsplrryvsiftal
slptyvslfqaqtyptrraiageivrtllknqtlistpahlenvleilkvlikegsqppa
gypgvvqprarpletdetmeeqgwlarlvhlihsddndtqfrllqmtrkayaegnerirt
ttpplitaglklarrfkarehyddnwssqssslfkflhsaistlytrvngpgvadlclrl
fcscgqvadmtefeevayeffaqaftvyeesisdskaqfqavcviasalhrtrnfgreny
dtlitkcaqhaskllrkpdqcravylashlwwatpiaargetedtelyrdgkrvleclqr
alrvadscmetatsielfveildryvyyfdqrnesvttkylnglielihsnlagnqqdsa
sveasrkhfiqtlemiqskefegivvapk

    Sequence, based on observed residues (ATOM records):
    >7blrC (C:)
rlledaliavrqqtammrkfldtpgklmdalkccstlvselrtsslspkqyyelymavfd
alrylsahlrenhpvnhladlyelvqyagniiprlylmitvgtaymsidgapvkelmkdm
mdmsrgvqhpvrglflryylsgqardylptgdsdgpegnlqdsinfiltnfvemnklwvr
lqhqghsrerdlrtqerrelqllvgsnivrlsqlvdlptyrdsilgplleqivqcrdila
qeyllevitqvfpdeyhlhtldqflgavsrlnphvnvkaivigmmnrlsdyaerevplyd
iffdqvqhlvqaqhlpiqdtialccslanlslniyperldyvdgilayalakvkehansa
dlhsqpaqqsllsllqsplrryvsiftalslptyvslfqaqtyptrraiageivrtllkn
qtlistpahlenvleilkvlikegetdetmeeqgwlarlvhlihsddndtqfrllqmtrk
ayaegnerirtttpplitaglklarrfkarehyddnwssqssslfkflhsaistlytrvn
gpgvadlclrlfcscgqvadmtefeevayeffaqaftvyeesisdskaqfqavcviasal
hrtrnfgrenydtlitkcaqhaskllrkpdqcravylashlwwatpiaargetedtelyr
dgkrvleclqralrvadscmetatsielfveildryvyyfdqrnesvttkylnglielih
snlagnqqdsasveasrkhfiqtlemiq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7blrD (D:)
smaflilvignlhipdraldippkfkkllspgkisqtlclgnltdratydylrsispdlk
ivrgrmdveatslplmqvvthgslrigflegftlvseepdvllaeankldvdvlcwaggs
hrfecfeymdkffvnpgsatgafttdwlaegeevvpsfclmdvqgisltlyvyqlrkden
gtenvavekvtytkpveptgas

    Sequence, based on observed residues (ATOM records):
    >7blrD (D:)
smaflilvignlhipdraldippkfkkllspgkisqtlclgnltdratydylrsispdlk
ivrgrmdveatslplmqvvthgslrigflegftlvseepdvllaeankldvdvlcwaggs
hrfecfeymdkffvnpgsatgafttdwvvpsfclmdvqgisltlyvyqlrkdtenvavek
vtytkpv