PDB entry 7bln

View 7bln on RCSB PDB site
Description: vps35/vps29 arch of metazoan membrane-assembled retromer:snx3 complex modelled with human proteins
Deposited on 2021-01-18, released 2021-02-10
The last revision was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: EM
Resolution: 8.9 Å
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vacuolar protein sorting-associated protein 35
    Species: Homo sapiens [TaxId:9606]
    Gene: VPS35, MEM3, TCCCTA00141
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: VPS29, DC15, DC7, MDS007
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Vacuolar protein sorting-associated protein 35
    Species: Homo sapiens [TaxId:9606]
    Gene: VPS35, MEM3, TCCCTA00141
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Homo sapiens [TaxId:9606]
    Gene: VPS29, DC15, DC7, MDS007
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7blnA (A:)
mpttqqspqdeqeklldeaiqavkvqsfqmkrcldknklmdalkhasnmlgelrtsmlsp
ksyyelymaisdelhylevyltdefakgrkvadlyelvqyagniiprlyllitvgvvyvk
sfpqsrkdilkdlvemcrgvqhplrglflrnyllqctrnilpdegeptdeettgdisdsm
dfvllnfaemnklwvrmqhqghsrdrekrererqelrilvgtnlvrlsqlegvnverykq
ivltgileqvvncrdalaqeylmeciiqvfpdefhlqtlnpflracaelhqnvnvkniii
alidrlalfahredgpgipadiklfdifsqqvatviqsrqdmpsedvvslqvslinlamk
cypdrvdyvdkvlettveifnklnlehiatssavskeltrllkipvdtynniltvlklkh
fhplfeyfdyesrksmscyvlsnvldynteivsqdqvdsimnlvstliqdqpdqpvedpd
pedfadeqslvgrfihllrsedpdqqylilntarkhfgaggnqrirftlpplvfaayqla
frykenskvddkwekkcqkifsfahqtisalikaelaelplrlflqgalaageigfenhe
tvayefmsqafslyedeisdskaqlaaitliigtfermkcfseenheplrtqcalaaskl
lkkpdqgravstcahlfwsgrntdkngeelhggkrvmeclkkalkianqcmdpslqvqlf
ieilnryiyfyekendavtiqvlnqliqkiredlpnlesseeteqinkhfhntlehlrlr
respesegpiyeglil

    Sequence, based on observed residues (ATOM records):
    >7blnA (A:)
qeklldeaiqavkvqsfqmkrcldknklmdalkhasnmlgelrtsmlspksyyelymais
delhylevyltdefakgrkvadlyelvqyagniiprlyllitvgvvyvksfpqsrkdilk
dlvemcrgvqhplrglflrnyllqctrnilpdegeptdeettgdisdsmdfvllnfaemn
klwvrmqhqghsrdrekrererqelrilvgtnlvrlsqlegvnverykqivltgileqvv
ncrdalaqeylmeciiqvfpdefhlqtlnpflracaelhqnvnvkniiialidrlalfah
redgpgipadiklfdifsqqvatviqsrqdmpsedvvslqvslinlamkcypdrvdyvdk
vlettveifnklnlehiatssavskeltrllkipvdtynniltvlklkhfhplfeyfdye
srksmscyvlsnvldynteivsqdqvdsimnlvstliqdqpdqpvedpdpedfadeqslv
grfihllrsedpdqqylilntarkhfgaggnqrirftlpplvfaayqlafrykenskvdd
kwekkcqkifsfahqtisalikaelaelplrlflqgalaageigfenhetvayefmsqaf
slyedeisdskaqlaaitliigtfermkcfseenheplrtqcalaaskllkkpdqgravs
tcahlfwsgrntdkngeelhggkrvmeclkkalkianqcmdpslqvqlfieilnryiyfy
ekendavtiqvlnqliqkiredlpnlesseeteqinkhfhntlehlrlr

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >7blnB (B:)
mlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylktlagdvhivr
gdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdilisghthkfe
afehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligddvkverieyk
kp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7blnC (C:)
mpttqqspqdeqeklldeaiqavkvqsfqmkrcldknklmdalkhasnmlgelrtsmlsp
ksyyelymaisdelhylevyltdefakgrkvadlyelvqyagniiprlyllitvgvvyvk
sfpqsrkdilkdlvemcrgvqhplrglflrnyllqctrnilpdegeptdeettgdisdsm
dfvllnfaemnklwvrmqhqghsrdrekrererqelrilvgtnlvrlsqlegvnverykq
ivltgileqvvncrdalaqeylmeciiqvfpdefhlqtlnpflracaelhqnvnvkniii
alidrlalfahredgpgipadiklfdifsqqvatviqsrqdmpsedvvslqvslinlamk
cypdrvdyvdkvlettveifnklnlehiatssavskeltrllkipvdtynniltvlklkh
fhplfeyfdyesrksmscyvlsnvldynteivsqdqvdsimnlvstliqdqpdqpvedpd
pedfadeqslvgrfihllrsedpdqqylilntarkhfgaggnqrirftlpplvfaayqla
frykenskvddkwekkcqkifsfahqtisalikaelaelplrlflqgalaageigfenhe
tvayefmsqafslyedeisdskaqlaaitliigtfermkcfseenheplrtqcalaaskl
lkkpdqgravstcahlfwsgrntdkngeelhggkrvmeclkkalkianqcmdpslqvqlf
ieilnryiyfyekendavtiqvlnqliqkiredlpnlesseeteqinkhfhntlehlrlr
respesegpiyeglil

    Sequence, based on observed residues (ATOM records):
    >7blnC (C:)
qeklldeaiqavkvqsfqmkrcldknklmdalkhasnmlgelrtsmlspksyyelymais
delhylevyltdefakgrkvadlyelvqyagniiprlyllitvgvvyvksfpqsrkdilk
dlvemcrgvqhplrglflrnyllqctrnilpdegeptdeettgdisdsmdfvllnfaemn
klwvrmqhqghsrdrekrererqelrilvgtnlvrlsqlegvnverykqivltgileqvv
ncrdalaqeylmeciiqvfpdefhlqtlnpflracaelhqnvnvkniiialidrlalfah
redgpgipadiklfdifsqqvatviqsrqdmpsedvvslqvslinlamkcypdrvdyvdk
vlettveifnklnlehiatssavskeltrllkipvdtynniltvlklkhfhplfeyfdye
srksmscyvlsnvldynteivsqdqvdsimnlvstliqdqpdqpvedpdpedfadeqslv
grfihllrsedpdqqylilntarkhfgaggnqrirftlpplvfaayqlafrykenskvdd
kwekkcqkifsfahqtisalikaelaelplrlflqgalaageigfenhetvayefmsqaf
slyedeisdskaqlaaitliigtfermkcfseenheplrtqcalaaskllkkpdqgravs
tcahlfwsgrntdkngeelhggkrvmeclkkalkianqcmdpslqvqlfieilnryiyfy
ekendavtiqvlnqliqkiredlpnlesseeteqinkhfhntlehlrlr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >7blnD (D:)
mlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylktlagdvhivr
gdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdilisghthkfe
afehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligddvkverieyk
kp