PDB entry 7ber

View 7ber on RCSB PDB site
Description: SFX structure of the MyD88 TIR domain higher-order assembly (solved, rebuilt and refined using an identical protocol to the MicroED structure of the MyD88 TIR domain higher-order assembly)
Class: protein binding
Keywords: SFX, serial femtosecond crystallography, MyD88, TIR domain, higher-order assembly, PROTEIN BINDING
Deposited on 2020-12-24, released 2021-03-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-05-26, with a file datestamp of 2021-05-21.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Myeloid differentiation primary response protein MyD88
  Species: Homo sapiens [TaxId:9606]
  Gene: MYD88
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q99836 (Start-142)
  Domains in SCOPe 2.08: d7bera_

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >7berA (A:)
  mghmperfdaficycpsdiqfvqemirqleqtnyrlklcvsdrdvlpgtcvwsiaselie
  krcrrmvvvvsddylqskecdfqtkfalslspgahqkrlipikykamkkefpsilrfitv
  cdytnpctkswfwtrlakalslplehhhhhh
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >7berA (A:)
  erfdaficycpsdiqfvqemirqleqtnyrlklcvsdrdvlpgtcvwsiaseliekrcrr
  mvvvvsddylqskecdfqtkfalslspgahqkrlipikykamkkefpsilrfitvcdytn
  pctkswfwtrlakalslp