PDB entry 7bdk

View 7bdk on RCSB PDB site
Description: Human Brr2 Helicase Region in complex with C-tail deleted Jab1 and ADP
Class: hydrolase
Keywords: rnp remodeling, pre-mRNA splicing, spliceosome catalytic activation, dexd/h-box RNA helicase, RNA and ATP binding, nucleus, hydrolase
Deposited on 2020-12-21, released 2021-06-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-06-30, with a file datestamp of 2021-06-25.
Experiment type: XRAY
Resolution: 2.52 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: U5 small nuclear ribonucleoprotein 200 kDa helicase
    Species: Homo sapiens [TaxId:9606]
    Gene: SNRNP200, ASCC3L1, HELIC2, KIAA0788
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Pre-mRNA-processing-splicing factor 8
    Species: Homo sapiens [TaxId:9606]
    Gene: PRPF8, PRPC8
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6P2Q9 (6-262)
      • expression tag (1-5)
    Domains in SCOPe 2.08: d7bdkj1, d7bdkj2
  • Heterogens: ADP, MG, HOH

PDB Chain Sequences:

  • Chain 'B':
    No sequence available.

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >7bdkJ (J:)
gplgsmtqtfssktewrvraisaanlhlrtnhiyvssddiketgytyilpknvlkkfici
sdlraqiagylygvsppdnpqvkeircivmvpqwgthqtvhlpgqlpqheylkemeplgw
ihtqpnespqlspqdvtthakimadnpswdgektiiitcsftpgsctltaykltpsgyew
grqntdkgnnpkgylpshyervqmllsdrflgffmvpaqsswnynfmgvrhdpnmkyelq
lanpkefyhevhrpshflnfall

    Sequence, based on observed residues (ATOM records): (download) 
    >7bdkJ (J:)
plgsmtqtfssktewrvraisaanlhlrtnhiyvsetgytyilpknvlkkficisdlraq
iagylygvsppdnpqvkeircivmvpqwgthqtvhlpgqlpqheylkemeplgwihtqpn
espqlspqdvtthakimadnpswdgektiiitcsftpgsctltaykltpsgyewgrqntd
kgnnpkgylpshyervqmllsdrflgffmvpaqsswnynfmgvrhdpnmkyelqlanpke
fyhevhrpshflnfall