PDB entry 7b07

View 7b07 on RCSB PDB site
Description: TgoT_6G12 apo
Class: DNA binding protein
Keywords: archaea, polymerase, DNA BINDING PROTEIN
Deposited on 2020-11-18, released 2020-12-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-12-30, with a file datestamp of 2020-12-25.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase
    Species: Thermococcus gorgonarius [TaxId:71997]
    Gene: pol, polA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56689 (0-End)
      • conflict (92)
      • conflict (140)
      • conflict (142)
      • conflict (484)
      • conflict (588)
      • conflict (608-609)
      • conflict (658)
      • conflict (663-664)
      • conflict (667-668)
      • conflict (670)
      • conflict (673)
      • conflict (675)
      • conflict (680)
      • conflict (703)
      • conflict (729)
    Domains in SCOPe 2.08: d7b07a1, d7b07a2
  • Heterogens: CA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >7b07A (A:)
mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhg
ttvrvvraekvkkkflgrpievwklyfthpqdqpairdkikehpavvdiyeydipfakry
lidkglipmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknidlpy
vdvvstekemikrflkvvkekdpdvlityngdnfdfaylkkrseklgvkfilgregsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytleavyeaifgqpkekvyaeeiaqawe
tgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrk
ayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvsp
dtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklld
yrqrlikilansfygyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyad
tdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffatkkkyavidee
dkittrglkmvrrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeql
viyqpitkqlhdyrargphvsvakrlaargikirpgtvisyivpkgsgrigdraipfdef
dpakhkydagyyienqvlpaverilrafgyrkedlryqktrqvglgawlkpkt

    Sequence, based on observed residues (ATOM records): (download) 
    >7b07A (A:)
mildtdyitedgkpvirifkkengefkidydrnfepyiyallkddsaiedvkkitaerhg
ttvrvvraekvkkkflgrpievwklyfthpqdqpairdkikehpavvdiyeydipfakry
lidkglipmegdeelkmlafaiatlyhegeefaegpilmisyadeegarvitwknidlpy
vdvvstekemikrflkvvkekdpdvlityngdnfdfaylkkrseklgvkfilgregsepk
iqrmgdrfavevkgrihfdlypvirrtinlptytleavyeaifgqpkekvyaeeiaqawe
tgeglervarysmedakvtyelgkeffpmeaqlsrlvgqslwdvsrsstgnlvewfllrk
ayernelapnkpderelarrresyaggyvkeperglwenivyldfrslypsiiithnvsp
dtlnregceeydvapqvghkfckdfpgfipsllgdlleerqkvkkkmkatidpiekklld
yrqrlikilansfygyygyakarwyckecaesvtawgrqyiettireieekfgfkvlyad
tdgffatipgadaetvkkkakefldyinaklpglleleyegfykrgffatkkkyavidee
dkittrglkmvrrdwseiaketqarvleailkhgdveeavrivkevteklskyevppeql
viyqpitkqlhdyrargphvsvakrlaargivisyivpkgsgrigdraipfdefdpakhk
ydagyyienqvlpaverilrafgyrkedl