PDB entry 7amy

View 7amy on RCSB PDB site
Description: nonameric cytoplasmic domain of flha from vibrio parahaemolyticus
Deposited on 2020-10-09, released 2021-06-02
The last revision was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: EM
Resolution: 3.75 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'B':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'C':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'D':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'E':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'F':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'G':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'H':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)
  • Chain 'I':
    Compound: Flagellar biosynthesis protein flhA
    Species: Vibrio parahaemolyticus [TaxId:670]
    Gene: flhA, C1S91_05000, C9I78_24000, CGI34_13080, D5E78_16030, E4P16_05430, F0L99_07770, WR32_16185
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0F5SXE4 (0-695)
      • expression tag (696-701)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7amyA (A:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyA (A:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7amyB (B:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyB (B:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >7amyC (C:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyC (C:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >7amyD (D:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyD (D:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >7amyE (E:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyE (E:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >7amyF (F:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyF (F:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'G':
    Sequence, based on SEQRES records:
    >7amyG (G:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyG (G:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'H':
    Sequence, based on SEQRES records:
    >7amyH (H:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyH (H:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg

  • Chain 'I':
    Sequence, based on SEQRES records:
    >7amyI (I:)
mltrlkqlqtstkgyigipivllmilamvilplppllldalftfnivlailvllvsttak
rpldfsvfptillvatllrltlnvastrivlleghnggdaagkviqafgevviggnyvvg
mvvfiilmiinfvvitkggerisevsarftldalpgkqmaidadlnaglidqetarlrrk
evaneadfhgsmdgaskfvrgdavagllilfiniiggisigvfehglpaseafktyallt
igdglvaqipslllataaaiivtrindsdngmsetmqkqllatpatlftvagimavigmv
pgmphlaffafagalgfagwrqskkpvqdtqieqvealsqamqeedtpltwddiphvhtl
slalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevrirdnlslkpnqytisln
gevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwiehqdkakalnmgyqvvd
dgtviathiskimktnlaelfthddveamtqrltqqapklaealaaalnpaqqlkvyrql
lldqvplkdirtiantmlessentkdpillaadvrcalkrtlvnliagqkpelnvyalsd
eleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirqqlkqqglppillvmpql
rpllaryartftqglavlsyneipenkqinvvgnlgenlyfq

    Sequence, based on observed residues (ATOM records):
    >7amyI (I:)
eedtpltwddiphvhtlslalgyrlvhlvnkdqgaplsqrirgvrrnlseqvgfllpevr
irdnlslkpnqytislngevieqgfieperlmaiavgdtygeidgilgsdpayqlpavwi
ehqdkakalnmgyqvvddgtviathiskimktnlaelfthddveamtqrltqqapklaea
laaalnpaqqlkvyrqllldqvplkdirtiantmlessentkdpillaadvrcalkrtlv
nliagqkpelnvyalsdeleqmlltslqqaqasgtvvldsfpiepnilgqfqqnlplirq
qlkqqglppillvmpqlrpllaryartftqglavlsyneipenkqinvvgnlg