PDB entry 7amk

View 7amk on RCSB PDB site
Description: zebrafish ret cadherin like domains 1 to 4.
Deposited on 2020-10-09, released 2021-02-03
The last revision was dated 2021-07-14, with a file datestamp of 2021-07-09.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: proto-oncogene tyrosine-protein kinase receptor ret
    Species: Danio rerio [TaxId:7955]
    Gene: ret, ret1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A8E7C6 (0-479)
      • engineered mutation (236)
      • engineered mutation (285)
      • engineered mutation (367)
      • engineered mutation (410)
  • Chain 'B':
    Compound: proto-oncogene tyrosine-protein kinase receptor ret
    Species: Danio rerio [TaxId:7955]
    Gene: ret, ret1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A8E7C6 (0-479)
      • engineered mutation (236)
      • engineered mutation (285)
      • engineered mutation (367)
      • engineered mutation (410)
  • Heterogens: CA, NAG, GOL, PGE, PEG, MES, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >7amkA (A:)
lyfpqrlyteniyvgqqqgspllqvismrefpterpyfflcshrdaftswfhideasgvl
ylnktlewsdfsslrsgsvrspkdltlkvgvsstppmkvmctilptvevklsfindtaps
cgqvelstlcfpekisnphitenrepgalrqlrrfthmsicpnytisygvvagssvpfav
ddstselvvtaqvdreekevyhldivcmvrternleevfrslhvniydeddnspyvqgtd
tedvlvefdrsegtvfgtlfvydrdttpvyptnqvqnklvgtlmtqdswiknnfaiehkf
reekaifgnvrgtvheyklklsqnlsvteqrsfllgylvndttfpgpegtvllhfnvtvl
pvpirfsqvtysftvsqkattysqigkvcvencqkfkgidvtyqleivdrqitaeaqscy
wavslaqnpndntgvlyvndtkvlrrpecqeleyvviaqeqqnklqaktqltvsfqgead

    Sequence, based on observed residues (ATOM records):
    >7amkA (A:)
lyfpqrlyteniyvgqqqgspllqvismrefpterpyfflcshrdaftswfhideasgvl
ylnktlewsdfsslrsgsvrspkdltlkvgvsstppmkvmctilptvevklsfindtaps
cgqvelstlcfpekisnphitenrepgalrqlrrfthmsicpnytisygvvagssvpfav
ddstselvvtaqvdreekevyhldivcmvrternleevfrslhvniydeddnspyvqgtd
tedvlvefdrsegtvfgtlfvydrdttpvyptnqvqnklvgtlmtqdswiknnfaiehkf
reekaifgnvrgtvheyklklsqnlsvteqrsfllgylvndttfpgpegtvllhfnvtvl
pvpirfsqvtysftvsqkattysqigkvcvencqkfkgidvtyqleivdrqitaeaqscy
wavslaqnpndntgvlyvndtkvlrrpecqeleyvviaqeqqnklqaktqltvsfq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >7amkB (B:)
lyfpqrlyteniyvgqqqgspllqvismrefpterpyfflcshrdaftswfhideasgvl
ylnktlewsdfsslrsgsvrspkdltlkvgvsstppmkvmctilptvevklsfindtaps
cgqvelstlcfpekisnphitenrepgalrqlrrfthmsicpnytisygvvagssvpfav
ddstselvvtaqvdreekevyhldivcmvrternleevfrslhvniydeddnspyvqgtd
tedvlvefdrsegtvfgtlfvydrdttpvyptnqvqnklvgtlmtqdswiknnfaiehkf
reekaifgnvrgtvheyklklsqnlsvteqrsfllgylvndttfpgpegtvllhfnvtvl
pvpirfsqvtysftvsqkattysqigkvcvencqkfkgidvtyqleivdrqitaeaqscy
wavslaqnpndntgvlyvndtkvlrrpecqeleyvviaqeqqnklqaktqltvsfqgead

    Sequence, based on observed residues (ATOM records):
    >7amkB (B:)
lyfpqrlyteniyvgqqqgspllqvismrefpterpyfflcshrdaftswfhideasgvl
ylnktlewsdfsslrsgsvrspkdltlkvgvsstppmkvmctilptvevklsfindtaps
cgqvelstlcfpekisnphitenrepgalrqlrrfthmsicpnytisygvvagssvpfav
ddstselvvtaqvdreekevyhldivcmvrternleevfrslhvniydeddnspyvqgtd
tedvlvefdrsegtvfgtlfvydrdttpvyvqnklvgtlmtqdswiknnfaiehkfreek
aifgnvrgtvheyklklsqnlsvteqrsfllgylvndttfpgpegtvllhfnvtvlpvpi
rfsqvtysftvsqkattysqigkvcvencqkfkgidvtyqleivdrqitaeaqscywavs
laqnpndntgvlyvndtkvlrrpecqeleyvviaqeqqnklqaktqltvsfq