PDB entry 6zyr

View 6zyr on RCSB PDB site
Description: Structure of IMP-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b
Class: antimicrobial protein
Keywords: antibiotic resistance, lactamase, zinc, inhibitor, ANTIMICROBIAL PROTEIN
Deposited on 2020-08-02, released 2021-01-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-07, with a file datestamp of 2021-07-02.
Experiment type: XRAY
Resolution: 1.87 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-lactamase imp-1
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (2-229)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6zyra_
  • Chain 'B':
    Compound: beta-lactamase imp-1
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (2-229)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6zyrb_
  • Chain 'C':
    Compound: beta-lactamase imp-1
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (2-229)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6zyrc_
  • Chain 'D':
    Compound: beta-lactamase imp-1
    Species: Serratia marcescens [TaxId:615]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P52699 (2-229)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d6zyrd_
  • Heterogens: QT2, ZN, EDO, NA, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6zyrA (A:)
gpaeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdtek
lvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsf
sgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpk
sakllkskygkaklvvpshsevgdasllkltleqavkglneskkpskpsn

    Sequence, based on observed residues (ATOM records): (download) 
    >6zyrA (A:)
slpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtw
fvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvn
ywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakl
lkskygkaklvvpshsevgdasllkltleqavkglnesk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6zyrB (B:)
gpaeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdtek
lvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsf
sgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpk
sakllkskygkaklvvpshsevgdasllkltleqavkglneskkpskpsn

    Sequence, based on observed residues (ATOM records): (download) 
    >6zyrB (B:)
slpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtw
fvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvn
ywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakl
lkskygkaklvvpshsevgdasllkltleqavkglnesk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6zyrC (C:)
gpaeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdtek
lvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsf
sgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpk
sakllkskygkaklvvpshsevgdasllkltleqavkglneskkpskpsn

    Sequence, based on observed residues (ATOM records): (download) 
    >6zyrC (C:)
slpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtw
fvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvn
ywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakl
lkskygkaklvvpshsevgdasllkltleqavkglneskkps

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6zyrD (D:)
gpaeslpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdtek
lvtwfvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsf
sgvnywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpk
sakllkskygkaklvvpshsevgdasllkltleqavkglneskkpskpsn

    Sequence, based on observed residues (ATOM records): (download) 
    >6zyrD (D:)
slpdlkiekldegvyvhtsfeevngwgvvpkhglvvlvnaeaylidtpftakdteklvtw
fvergykikgsisshfhsdstggiewlnsrsiptyaseltnellkkdgkvqatnsfsgvn
ywlvknkievfypgpghtpdnvvvwlperkilfggcfikpyglgnlgdanieawpksakl
lkskygkaklvvpshsevgdasllkltleqavkglnesk